Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq112 100 7e-16 seq432 93.3 1e-13 >seq112 Length=2547449 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||| ||| || ||| || || || ||||| || || ||| Sbjct 1633390 AAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTTGCAGGCAAG 1633331 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||||||||| | || || | || |||||| ||||||||||||||||||||||| Sbjct 1633330 CAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACATCCAGAAAGAGTCTACTCTTCAC 1633271 Query 206374 CTTGT 206378 ||||| Sbjct 1633270 CTTGT 1633266 Score = 95.1 bits (104), Expect = 3e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||||||||||||||||||||||| || ||||||| || || | ||||||||| Sbjct 1633266 ACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1633325 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCC 204848 |||||||| || || ||||| |||| Sbjct 1633326 AGCTGCTTGCCTGCAAAGATCAGCC 1633350 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||| || || ||| || || || ||||| || || ||| Sbjct 1632706 AAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAGCAGAGGCTGATCTTTGCAGGCAAG 1632647 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| ||||||||||| | || || ||||||||||| ||||||| || || || || ||| Sbjct 1632646 CAGCTGGAAGATGGACGCACCCTGTCCGATTACAACATCCAGAAGGAATCCACCCTCCAC 1632587 Query 206374 CTTGT 206378 ||||| Sbjct 1632586 CTTGT 1632582 >seq432 Length=995019 Score = 93.3 bits (102), Expect = 1e-13 Identities = 153/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 206159 AGGCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAG 206218 |||| || ||| ||||| || ||| || || || || || || ||||| ||||||| Sbjct 871278 AGGCAAACATG---CAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCTTGGAAG 871334 Query 206219 TGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTT 206278 | ||| |||||| | || || ||| ||||| || || || || || ||| Sbjct 871335 TTGAACCCAGTGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTC 871394 Query 206279 TGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGG 206338 |||||| || || || ||||| || || || ||| ||||||| ||| | || || Sbjct 871395 CCCCGGACCAGCAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGACGGACGCACCCTGT 871454 Query 206339 CCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 | || |||||| |||||||||||||||| || || || || Sbjct 871455 CTGACTACAACATCCAGAAAGAGTCTACCCTGCATCTCGT 871494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181516610774969