Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq207 114 1e-20 >seq207 Length=1524075 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| ||||||||||| |||||||| | || || ||||| ||||| ||||| |||| Sbjct 1115146 GACATGGGCGATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGCACTCCTAG 1115205 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||| ||||| || | |||||||| ||||| |||| || ||||| || ||||| Sbjct 1115206 TCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGAACATAGAA 1115265 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAG 6773 ||||| || | || || || || | |||||||||| Sbjct 1115266 CTGGCAAAGAGCATGACAAGGTGGCAAAGCCATCAGAG 1115303 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 34572 CTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGC 34631 |||||||||| | || || || || | || ||||| ||||| || ||||| || Sbjct 1115303 CTCTGATGGCTTTGCCACCTTGTCATGCTCTTTGCCAGTTCTATGTTCTAAATGGTGAAT 1115244 Query 34632 TGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTG 34691 |||| ||||| |||||||| | || ||||| ||||| |||| ||||| ||||| |||| Sbjct 1115243 TGTCTTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTG 1115184 Query 34692 CTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 | || || | |||||||| ||||||||||| |||||| Sbjct 1115183 CCAGCTATTCGCTGCTCACATACATGATCGCCCATGTC 1115146 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||| ||||||||||| || || || || ||||| || |||||||| Sbjct 1118517 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 1118576 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | || ||| |||| ||||| || || || || || | || ||||| |||||| Sbjct 1118577 CTGGTGCCAAAACCCTGCTTATCCAGGAATTCACGTGATCCATTGGCATCCCAAATCTTC 1118636 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043 || ||| | ||||||||||||| Sbjct 1118637 ACACCCTTTGCAGAGAGCTCCTTGG 1118661 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361 ||||||||||||| | ||| |||||||| ||||| || | || || || || || | Sbjct 1118661 CCAAGGAGCTCTCTGCAAAGGGTGTGAAGATTTGGGATGCCAATGGATCACGTGAATTCC 1118602 Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421 |||| |||| ||| || | | |||||||| || ||||| || || || || |||| Sbjct 1118601 TGGATAAGCAGGGTTTTGGCACCAGAGAGGAGGGGGATTTGGGACCAGTTTATGGTTTCC 1118542 Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446 ||||||| |||||||| || || || Sbjct 1118541 AGTGGAGGCACTTTGGAGCAGAATA 1118517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448149835708080