Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq131 118 8e-22
seq60 102 6e-17
>seq131
Length=2612808
Score = 118 bits (130), Expect = 8e-22
Identities = 92/110 (84%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || ||| ||||||| || | |||||||||| |||| ||||| || | |||||||||
Sbjct 1892567 CTTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTCAAAGGACGATGCTTCTCAGG 1892626
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| |||||||| || ||||||||||| |||||| |||||||||| |||
Sbjct 1892627 AATGGAGAACCAGGTTTTTTTACCCATTATCACTGCATTCTGTTTACCTG 1892676
>seq60
Length=5294655
Score = 102 bits (112), Expect = 6e-17
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||||||||| || ||||||||||| || ||||| || ||||| | || || |
Sbjct 706349 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAGTCCCCCT 706408
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| |||||| ||||||| | ||||| | ||| | |||||||| ||||||||||
Sbjct 706409 CCTCTCTGGTGCAAAAACCCTGCTTATCCAGGAATTCACGTGATCCATTGGCATCCCAAA 706468
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181
| | ||| || ||| || |||||||||
Sbjct 706469 TCTTCACACCCTTTGCAGAGAGCTCTTTG 706497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361217769926843
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |