Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq60 105 5e-18 >seq60 Length=5294655 Score = 105 bits (116), Expect = 5e-18 Identities = 113/146 (77%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| ||||| | ||| || || ||| Sbjct 706354 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAGTCCCCCTCCTCT 706413 Query 97462 CTATCACAGAAACCAAGCTTATCTA--AATAGGACCTAGATCCATTTGCATCCCAAATGT 97519 || || ||||| ||||||| | ||| || | |||||||| ||||||||||| | Sbjct 706414 CTGGTGCAAAAACCCTGCTTATCCAGGAAT-TCACGT-GATCCATTGGCATCCCAAATCT 706471 Query 97520 GCACACCAGATGCTGCAAGCTCTTTG 97545 |||||| ||| | ||||||||| Sbjct 706472 TCACACCCTTTGCAGAGAGCTCTTTG 706497 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 699212 GTGACATGGGCAATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGCACTCCT 699271 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || | | ||| | ||||| Sbjct 699272 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCTCCGTTTAGAACATAG 699331 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | ||||||| || ||||| ||||| Sbjct 699332 AACTGGCAAAGGGCATGACAAGGTGGCAAAGCCAT 699366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346751908717010