Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq60 105 5e-18
>seq60
Length=5294655
Score = 105 bits (116), Expect = 5e-18
Identities = 113/146 (77%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
|||||||||||||| |||||||| ||||| |||||||| ||||| | ||| || || |||
Sbjct 706354 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAGTCCCCCTCCTCT 706413
Query 97462 CTATCACAGAAACCAAGCTTATCTA--AATAGGACCTAGATCCATTTGCATCCCAAATGT 97519
|| || ||||| ||||||| | ||| || | |||||||| ||||||||||| |
Sbjct 706414 CTGGTGCAAAAACCCTGCTTATCCAGGAAT-TCACGT-GATCCATTGGCATCCCAAATCT 706471
Query 97520 GCACACCAGATGCTGCAAGCTCTTTG 97545
|||||| ||| | |||||||||
Sbjct 706472 TCACACCCTTTGCAGAGAGCTCTTTG 706497
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
||||||||||| ||||| | || | || |||||||| ||||| || |||||||| |||
Sbjct 699212 GTGACATGGGCAATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGCACTCCT 699271
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236
||||||||||| | || || ||||| | || || || | | ||| | |||||
Sbjct 699272 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCTCCGTTTAGAACATAG 699331
Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271
||||| | | ||||||| || ||||| |||||
Sbjct 699332 AACTGGCAAAGGGCATGACAAGGTGGCAAAGCCAT 699366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346751908717010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |