Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq314 141 2e-28
>seq314
Length=515724
Score = 141 bits (156), Expect = 2e-28
Identities = 128/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 51895 GCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATA 51954
|| ||||||| ||| ||| | |||||||| || |||||||||||||| ||||| |||||
Sbjct 377150 GCTTTATGGTGGTATTATGTCTCCAAAGGAATTGAATACTTGGATACAGTATTCTTCATC 377209
Query 51955 CTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTT 52014
|| ||||| |||||||| || ||||||| || || || ||||| ||||| || |||||
Sbjct 377210 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 377269
Query 52015 ACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055
||| | | ||||| |||||||| ||| |||| || || ||
Sbjct 377270 ACTTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 377310
Score = 107 bits (118), Expect = 4e-18
Identities = 105/133 (79%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|| ||||||||||||||| | ||| | ||||| ||||| |||||||||| ||||||||
Sbjct 379036 GCTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTCATTATGTACATGTATTATGGA 379095
Query 52117 ATGGCCGCTTGTGGTCCT-ATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| || || ||||| ||| | |||||||| || || ||||||||||| || | || ||
Sbjct 379096 TTAGCTGCCTGTGGCCCTAAATTTCAGAAA-TACCTGTGGTGGAAACGATACTTGACCAT 379154
Query 52176 AATGCAGTTGGTA 52188
| |||| ||||||
Sbjct 379155 ATTGCAATTGGTA 379167
Score = 100 bits (110), Expect = 5e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| ||||||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 379858 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 379917
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
|| |||||||| || ||| || ||| ||||| || | | ||||| || ||||||||
Sbjct 379918 CCCTAAATGGATGCACTGGGGTGTAATTTTCTATGCTGTCACCTTCATTTTCCTGTTTGG 379977
Query 52305 TAACTTCTATTTTAGAACATACAAG 52329
||||||||| | | | ||||| |||
Sbjct 379978 TAACTTCTACTATCGGACATATAAG 380002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923109177083720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |