Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq25 405 4e-108
>seq25
Length=8201792
Score = 405 bits (448), Expect = 4e-108
Identities = 735/1060 (69%), Gaps = 28/1060 (3%)
Strand=Plus/Plus
Query 107568 CAGGCCCTCCTAGACAACCTGGA-AGT-GAAGAAAAAGCGGTCGCCTCTCACTGGCACCT 107625
||||| ||||| ||||||||| | | ||| ||||| | | ||| ||| | | |
Sbjct 6009960 CAGGCACTCCTCAGCAACCTGGAGACTAGAAACAAAAGGGCACCCCTGACACCCGAAGCG 6010019
Query 107626 ATTACCTCAACATAACCAGAGACTGTGAGC-GCTTCAAGG---CCCAAAGGAAGTTCATA 107681
||||| ||||| || | ||||| ||| ||||||||| ||| || |||||
Sbjct 6010020 --TACCTTAACATGACGAAGGACTGC-AGCAGCTTCAAGGAGACCC---GGCGCTTCATT 6010073
Query 107682 CAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCAT 107741
||||||||||||| || || ||| || || |||||||||||||| || || ||||
Sbjct 6010074 GAGTTCCCACTGAGCAAGGAGGAGGCCGAGTTTCCCATTGCCTACTCCATAGTCATCCAC 6010133
Query 107742 GAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATAC 107801
| || || || | || || ||||| ||||| | || || | || ||||| | |||
Sbjct 6010134 AACAAAATCGAGATGTTCGAGCGGCTCCTGCGGTCTGTCTACGTGCCACAGAATGTCTAC 6010193
Query 107802 TGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATT 107861
||||||||| |||| |||||||||| | ||| | ||||| || | ||||||
Sbjct 6010194 TGTGTCCACATGGACAGCAAGTCCCCAGCTGCCTTCCAGGAGGCCGTGAGGGCCATCGCC 6010253
Query 107862 TCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGG 107921
||||||||||||| ||||| ||||||| ||| ||||| ||||||||||||
Sbjct 6010254 GCCTGCTTCCCCAACGTCTTTGTGGCCAGCCGCCTGGAGAACGTGGTCTATGCCTCCTGG 6010313
Query 107922 TCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGG 107981
|| | |||| |||||||| ||||| ||| | ||| |||| |||||| | ||||| |||
Sbjct 6010314 TCACGCCTGCAGGCTGACCTCAACTGCATGCAGGACCTGCTGCAGAGCCCCGTGCCGTGG 6010373
Query 107982 AAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTC 108041
| ||| | || || || ||||| || ||||||||||| || |||||||| |||||||||
Sbjct 6010374 CACTACGTCCTCAACACCTGCGGCACCGACTTCCCCATCAAAACCAATGCGGAGATGGTC 6010433
Query 108042 CTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCC 108101
| |||||| ||||| || |||| ||||||| |||||||| ||| || || ||||
Sbjct 6010434 CGCGCCCTCCAGATGCTGCAGGGGCAGAACAGCATGGAGTCGGAGAAGCCATC---GTCC 6010490
Query 108102 aaaaaaaa---TCGCTGGAAATACCGCTATGAGGTGACAGACACACTGT---ACCCTACC 108155
| || | || ||||| |||| | | || ||| || | | | | | ||
Sbjct 6010491 TACAAGCAGCTGCGGTGGAAGTACCACCACGAAGTGGGGGATGCCATCTCCAAGACATCC 6010550
Query 108156 AGCAAGATGAAGGACCCTC-CCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTT 108214
| | ||| | | || || || || | | ||||||||||| || | || || |
Sbjct 6010551 ACCGAGAAGCTG--CCGTCACCGCT--CAGCTCGCCCATGTTCACGGGCAGCGCGTACAT 6010606
Query 108215 TGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTA-AATCCCAAAGACTGG 108273
|| || | || ||||| || || || |||| || |||| | | | | || |
Sbjct 6010607 TGCGGTGACGCGGGCCTTCGTGCAGCACATCTTCGAGGACCCCACAGTGCTGCAG-TTTC 6010665
Query 108274 TTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTG 108333
| || |||| ||| |||||||| ||||||||||| ||| ||||||| ||||| ||||
Sbjct 6010666 TGGAGTGGGCCAAGGACACCTACAGCCCCGACGAGCACGTCTGGGCTACCCTCACCCGTG 6010725
Query 108334 CTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTG 108393
|| | |||| ||| | | || | || ||||| | |||| ||||||| |
Sbjct 6010726 TGCCTGGCGTGCCGGGCGCCATGCCCCACAACGACAAGTTCGAGCTCTCGGACATGAACG 6010785
Query 108394 CCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTT 108453
|| | || | || ||||| |||||||||| ||||| || ||||| ||| ||||| |
Sbjct 6010786 CCCTGCCCCGCCTGGTCAAATGGCAGTACCTGGAGGGCGACACCAGCAAGGGAGCGCCCT 6010845
Query 108454 ATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGT 108513
| | |||||| | || | | | | ||| ||||||| ||||||| ||| ||| |||
Sbjct 6010846 ACCCGCCCTGCACCGGCCGGTACCAGCGCGCCGTCTGCATCTACGGGGTCGGAGACGTGT 6010905
Query 108514 ACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATA 108573
|||||| |||| | | || ||||||||||| |||||||| ||||| |||||| |||
Sbjct 6010906 CCTGGATGCTCCGGCAGCACCACCTCTTGGCCAACAAGTTCGACCCCCAGGTGGACGATG 6010965
Query 108574 ACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGC 108613
|| | | |||||| | || ||| |||| || || | |||
Sbjct 6010966 CCGCCATCCAGTGCCTCGAGGAGCACCTGCGCCACAGGGC 6011005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348236571314082
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |