Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 1e-14 seq37 93.3 4e-14 >seq11 Length=12384036 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 14476 GTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAA 14535 |||||| ||||| || | ||||||||||||||| ||||| |||||||| || ||||| || Sbjct 4520354 GTATGTGTCAATCAGAAGGCTATACATTTCAGAATGTATATTTTCCATGGCAATCTGGAA 4520295 Query 14536 ACCATAAAAACATCTAGCTTCTGACCATTGTACCTCT 14572 ||||| ||||| | |||||||| |||||| ||| Sbjct 4520294 GCCATAGAAACAACGAGCTTCTGTGACTTGTACTTCT 4520258 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954 || || || || ||||| | |||||||||| |||| || ||||||||||| || || Sbjct 4524070 TTTGACATGACTCCCATCCTCTGATATTCACCTACTCGCTTCTCAAAGAAGTTGGTCTTG 4524011 Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATT 13992 |||||||| || || |||||||| |||||||| ||||| Sbjct 4524010 CCTTCCAGAGAGATGTTTTCCATGAAATCAAAAGGATT 4523973 >seq37 Length=6782005 Score = 93.3 bits (102), Expect = 4e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| || || ||||| || || || || | ||| ||||||| || | || | Sbjct 2516349 CCTCATCTCTGCTGATGAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 2516408 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||||||||| |||||||| || || || ||||| || || || ||||||||||| | Sbjct 2516409 TCAGCCAAAATATAGCAGCGAACGAGCCCGAGAAGAAGATGCCTTCGACTGCAGCAAAGG 2516468 Query 14346 C 14346 | Sbjct 2516469 C 2516469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482299819373240