Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq37 87.8 2e-12
seq11 87.8 2e-12
>seq37
Length=6782005
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| || || ||||| || || || || | ||| ||||||| || | || |
Sbjct 2516349 CCTCATCTCTGCTGATGAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 2516408
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||||||||| ||||| || || || || ||||| || || || ||||||||||| |
Sbjct 2516409 TCAGCCAAAATATAGCAGCGAACGAGCCCGAGAAGAAGATGCCTTCGACTGCAGCAAAGG 2516468
Query 14014 C 14014
|
Sbjct 2516469 C 2516469
>seq11
Length=12384036
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 14144 GTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAA 14203
|||||| ||||| || | ||||||||||||||| ||||| |||||||| || ||||| ||
Sbjct 4520354 GTATGTGTCAATCAGAAGGCTATACATTTCAGAATGTATATTTTCCATGGCAATCTGGAA 4520295
Query 14204 ACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC 14239
||||| || || | |||||| | |||||||||
Sbjct 4520294 GCCATAGAAACAACGAGCTTCTGTGACTTGTACTTC 4520259
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 13563 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13622
|| || || || ||||| | |||||||||| |||| || ||||||||||| || ||
Sbjct 4524070 TTTGACATGACTCCCATCCTCTGATATTCACCTACTCGCTTCTCAAAGAAGTTGGTCTTG 4524011
Query 13623 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATT 13660
|||||||| || || |||||||| |||||||| |||||
Sbjct 4524010 CCTTCCAGAGAGATGTTTTCCATGAAATCAAAAGGATT 4523973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479682467816200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |