Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq206 102 7e-17
seq13 98.7 9e-16
>seq206
Length=1612959
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||||| |||| ||| | ||||| || ||||| || || | ||| || || |
Sbjct 825230 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825289
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || ||| |||||||| || || | || || || || ||||| || ||||||
Sbjct 825290 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825349
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| | ||| | || || ||||| || | | || || | | |||||
Sbjct 825350 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 825409
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|||| |||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct 825410 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATGC 825458
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||||| |||| ||| | ||||| || ||||| || || | ||| || || |
Sbjct 825458 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825517
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || ||| |||||||| || || | || || || || ||||| || ||||||
Sbjct 825518 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825577
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| | ||| | || || ||||| || | | || || | | |||||
Sbjct 825578 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 825637
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|||| |||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct 825638 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATGC 825686
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||||| |||| ||| | ||||| || ||||| || || | ||| || || |
Sbjct 825686 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825745
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || ||| |||||||| || || | || || || || ||||| || ||||||
Sbjct 825746 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825805
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| | ||| | || || ||||| || | | || || | | |||||
Sbjct 825806 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 825865
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|||| |||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct 825866 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATGC 825914
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||||| |||| ||| | ||||| || ||||| || || | ||| || || |
Sbjct 825914 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825973
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || ||| |||||||| || || | || || || || ||||| || ||||||
Sbjct 825974 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 826033
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| | ||| | || || ||||| || | | || || | | |||||
Sbjct 826034 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 826093
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|||| |||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct 826094 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATGC 826142
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||||| |||| ||| | ||||| || ||||| || || | ||| || || |
Sbjct 826142 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 826201
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || ||| |||||||| || || | || || || || ||||| || ||||||
Sbjct 826202 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 826261
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| | ||| | || || ||||| || | | || || | | |||||
Sbjct 826262 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 826321
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|||| |||||||| || ||||| || || ||||||||||||||||||
Sbjct 826322 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 826369
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || |||| |||| ||| | ||||| || ||||| || || | ||| || || |
Sbjct 825002 CCACCCCTCAGGCGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825061
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || ||| |||||||| || || | || || || || ||||| || ||||||
Sbjct 825062 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825121
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| | ||| | || || ||||| || | | || || | | |||||
Sbjct 825122 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 825181
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|||| |||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct 825182 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATGC 825230
>seq13
Length=12215238
Score = 98.7 bits (108), Expect = 9e-16
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||||||| || || ||||||| | || ||||| || |||||||| || || |||
Sbjct 3521360 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCCTCCTTG 3521419
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || |||||||| ||| ||||| | | ||||| || | ||||||
Sbjct 3521420 TCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAAGGTGATG 3521479
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011
|| || || || || || |||||||||||||||||| ||
Sbjct 3521480 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATGTTT 3521518
Score = 91.5 bits (100), Expect = 1e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| |||||||| || || | ||||| | || |||||||| || ||||| || |||||
Sbjct 3520984 ATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGAATGCCCTCTTT 3521043
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | || || |||||||| | | ||||| | | || || || | |||||
Sbjct 3521044 GTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCCACCTCCAAGGTGAT 3521103
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
||| || || || || || |||||||||||||||||||
Sbjct 3521104 GGTCTTACCTGTCAGGGTCTTCACAAAGATCTGCATGC 3521141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448248651561480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |