Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq13 89.7 4e-13
seq206 86.0 5e-12
>seq13
Length=12215238
Score = 89.7 bits (98), Expect = 4e-13
Identities = 132/185 (71%), Gaps = 4/185 (2%)
Strand=Plus/Plus
Query 16756 GTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTG 16815
||||||||||| || ||| |||| |||| || ||||| ||| | || |||| |||
Sbjct 3521335 GTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTG 3521394
Query 16816 TTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTG 16873
||||| ||| | |||||| ||||| || || || ||| || | | | |||
Sbjct 3521395 CTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACATTCTCGATGGTG 3521452
Query 16874 TCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGC 16933
|||| |||||| |||| ||||||||| || || ||||| || || ||||| ||||||
Sbjct 3521453 TCGCTGGGCTCGACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGC 3521512
Query 16934 ATTTT 16938
|| ||
Sbjct 3521513 ATGTT 3521517
>seq206
Length=1612959
Score = 86.0 bits (94), Expect = 5e-12
Identities = 160/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| || | ||| || | ||||| ||||| || || || ||||||||||| | |
Sbjct 826142 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 826201
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | || |||| || ||||| || |||| | || ||| ||||| |||
Sbjct 826202 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 826261
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| || | ||| || || || |||||| | | | || |||| ||||||
Sbjct 826262 ATGCCTTCCTGGTCCTGGATCTTGGC--CTTCACATTCTCAATGGTATCGCTGGGCTCGA 826319
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| | ||||||||| || || ||||| || || ||||| |||||||| |||
Sbjct 826320 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTG 826372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405050513283070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |