Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 4e-13 seq206 86.0 5e-12 >seq13 Length=12215238 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/185 (71%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 16756 GTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTG 16815 ||||||||||| || ||| |||| |||| || ||||| ||| | || |||| ||| Sbjct 3521335 GTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTG 3521394 Query 16816 TTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTG 16873 ||||| ||| | |||||| ||||| || || || ||| || | | | ||| Sbjct 3521395 CTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACATTCTCGATGGTG 3521452 Query 16874 TCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGC 16933 |||| |||||| |||| ||||||||| || || ||||| || || ||||| |||||| Sbjct 3521453 TCGCTGGGCTCGACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGC 3521512 Query 16934 ATTTT 16938 || || Sbjct 3521513 ATGTT 3521517 >seq206 Length=1612959 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || | ||| || | ||||| ||||| || || || ||||||||||| | | Sbjct 826142 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 826201 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || |||| || ||||| || |||| | || ||| ||||| ||| Sbjct 826202 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 826261 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || | ||| || || || |||||| | | | || |||| |||||| Sbjct 826262 ATGCCTTCCTGGTCCTGGATCTTGGC--CTTCACATTCTCAATGGTATCGCTGGGCTCGA 826319 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || | ||||||||| || || ||||| || || ||||| |||||||| ||| Sbjct 826320 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTG 826372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405050513283070