Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq206 98.7 9e-16 >seq206 Length=1612959 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| || || ||||||| | || || ||| | Sbjct 825456 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGC 825397 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || ||| ||||| || ||| ||| | ||||| ||||| |||||||| Sbjct 825396 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGACCAGGAAGGCATTCCTCCTGACCAG 825337 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | ||||| || ||||| || | ||||||| || || || || ||||| Sbjct 825336 CAGAGGTTGATTTTCGCTGGCAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAAC 825277 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||||||||| || || | ||||| | || ||||| || Sbjct 825276 ATCCAGAAAGAATCCACCCTGCACCTTGTGCTGCGTCTGAGAGGTGG 825230 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| || || ||||||| | || || ||| | Sbjct 825684 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGC 825625 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || ||| ||||| || ||| ||| | ||||| ||||| |||||||| Sbjct 825624 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGACCAGGAAGGCATTCCTCCTGACCAG 825565 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | ||||| || ||||| || | ||||||| || || || || ||||| Sbjct 825564 CAGAGGTTGATTTTCGCTGGCAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAAC 825505 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||||||||| || || | ||||| | || ||||| || Sbjct 825504 ATCCAGAAAGAATCCACCCTGCACCTTGTGCTGCGTCTGAGAGGTGG 825458 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| || || ||||||| | || || ||| | Sbjct 825912 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGC 825853 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || ||| ||||| || ||| ||| | ||||| ||||| |||||||| Sbjct 825852 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGACCAGGAAGGCATTCCTCCTGACCAG 825793 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | ||||| || ||||| || | ||||||| || || || || ||||| Sbjct 825792 CAGAGGTTGATTTTCGCTGGCAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAAC 825733 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||||||||| || || | ||||| | || ||||| || Sbjct 825732 ATCCAGAAAGAATCCACCCTGCACCTTGTGCTGCGTCTGAGAGGTGG 825686 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| || || ||||||| | || || ||| | Sbjct 826140 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGC 826081 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || ||| ||||| || ||| ||| | ||||| ||||| |||||||| Sbjct 826080 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGACCAGGAAGGCATTCCTCCTGACCAG 826021 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | ||||| || ||||| || | ||||||| || || || || ||||| Sbjct 826020 CAGAGGTTGATTTTCGCTGGCAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAAC 825961 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||||||||| || || | ||||| | || ||||| || Sbjct 825960 ATCCAGAAAGAATCCACCCTGCACCTTGTGCTGCGTCTGAGAGGTGG 825914 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | Sbjct 826368 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGC 826309 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || ||| ||||| || ||| ||| | ||||| ||||| |||||||| Sbjct 826308 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGACCAGGAAGGCATTCCTCCTGACCAG 826249 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | ||||| || ||||| || | ||||||| || || || || ||||| Sbjct 826248 CAGAGGTTGATTTTCGCTGGCAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAAC 826189 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||||||||| || || | ||||| | || ||||| || Sbjct 826188 ATCCAGAAAGAATCCACCCTGCACCTTGTGCTGCGTCTGAGAGGTGG 826142 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| || || ||||||| | || || ||| | Sbjct 825228 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGC 825169 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || ||| ||||| || ||| ||| | ||||| ||||| |||||||| Sbjct 825168 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGACCAGGAAGGCATTCCTCCTGACCAG 825109 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | ||||| || ||||| || | ||||||| || || || || ||||| Sbjct 825108 CAGAGGTTGATTTTCGCTGGCAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAAC 825049 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || || | ||||| Sbjct 825048 ATCCAGAAAGAATCCACCCTGCACCTTGTGCT 825017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433287899962295