Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq206 154 3e-32 seq13 152 9e-32 >seq206 Length=1612959 Score = 154 bits (170), Expect = 3e-32 Identities = 167/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || ||||| ||||| |||||||| || || || || || | | Sbjct 825011 AGGCGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGC 825070 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || ||||| || | || || ||||| || |||||||||||| Sbjct 825071 CCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCC 825130 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 | ||| || ||||| ||||| || ||| ||||| || ||| | || || || | ||| Sbjct 825131 TGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATC-GCTGGGCTCGACCTCAAGGGT 825189 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || || ||||| ||||| |||||||| Sbjct 825190 GATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825228 Score = 149 bits (164), Expect = 1e-30 Identities = 166/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || ||||| ||||| |||||||| || || || || || | | Sbjct 825239 AGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGC 825298 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || ||||| || | || || ||||| || |||||||||||| Sbjct 825299 CCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCC 825358 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 | ||| || ||||| ||||| || ||| ||||| || ||| | || || || | ||| Sbjct 825359 TGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATC-GCTGGGCTCGACCTCAAGGGT 825417 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || || ||||| ||||| |||||||| Sbjct 825418 GATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825456 Score = 149 bits (164), Expect = 1e-30 Identities = 166/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || ||||| ||||| |||||||| || || || || || | | Sbjct 825467 AGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGC 825526 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || ||||| || | || || ||||| || |||||||||||| Sbjct 825527 CCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCC 825586 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 | ||| || ||||| ||||| || ||| ||||| || ||| | || || || | ||| Sbjct 825587 TGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATC-GCTGGGCTCGACCTCAAGGGT 825645 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || || ||||| ||||| |||||||| Sbjct 825646 GATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825684 Score = 149 bits (164), Expect = 1e-30 Identities = 166/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || ||||| ||||| |||||||| || || || || || | | Sbjct 825695 AGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGC 825754 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || ||||| || | || || ||||| || |||||||||||| Sbjct 825755 CCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCC 825814 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 | ||| || ||||| ||||| || ||| ||||| || ||| | || || || | ||| Sbjct 825815 TGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATC-GCTGGGCTCGACCTCAAGGGT 825873 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || || ||||| ||||| |||||||| Sbjct 825874 GATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825912 Score = 149 bits (164), Expect = 1e-30 Identities = 166/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || ||||| ||||| |||||||| || || || || || | | Sbjct 825923 AGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGC 825982 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || ||||| || | || || ||||| || |||||||||||| Sbjct 825983 CCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCC 826042 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 | ||| || ||||| ||||| || ||| ||||| || ||| | || || || | ||| Sbjct 826043 TGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATC-GCTGGGCTCGACCTCAAGGGT 826101 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || || ||||| ||||| |||||||| Sbjct 826102 GATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 826140 Score = 149 bits (164), Expect = 1e-30 Identities = 166/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || ||||| ||||| |||||||| || || || || || | | Sbjct 826151 AGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGC 826210 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || ||||| || | || || ||||| || |||||||||||| Sbjct 826211 CCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCC 826270 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 | ||| || ||||| ||||| || ||| ||||| || ||| | || || || | ||| Sbjct 826271 TGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATC-GCTGGGCTCGACCTCAAGGGT 826329 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || |||||||| || || |||||||| Sbjct 826330 GATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 826368 >seq13 Length=12215238 Score = 152 bits (168), Expect = 9e-32 Identities = 144/181 (80%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 68282 GTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTG 68341 ||| || ||||| || || | ||| ||||| | |||||| || || || || || || || Sbjct 3521335 GTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTG 3521394 Query 68342 TTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 |||||||| |||||||| |||||||| || ||||| |||||||| |||||||||||| Sbjct 3521395 CTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC 3521454 Query 68402 TGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 ||| | || || |||||||||||||| || ||||| |||||||| || || ||||||| Sbjct 3521455 -GCTGGGCTCGACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCA 3521513 Query 68461 T 68461 | Sbjct 3521514 T 3521514 Score = 122 bits (134), Expect = 2e-22 Identities = 124/159 (78%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || ||||| || || || || || || || |||||||| || Sbjct 3520982 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGAATGCCCTCT 3521041 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGT 68422 ||||| || ||||| |||||||| || |||||||| |||| || || |||||||| Sbjct 3521042 TTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTC-GCTGGGCTCCACCTCCAAGGT 3521100 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || |||||||| || || |||||||| Sbjct 3521101 GATGGTCTTACCTGTCAGGGTCTTCACAAAGATCTGCAT 3521139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921534926513960