Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq206 105 6e-18
seq13 93.3 4e-14
>seq206
Length=1612959
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| |||||||| || |||||||| || || ||||| |||||| || || || |||
Sbjct 825032 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCA 825091
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | || | | ||| ||||| |||||||||||||| | ||| ||||| ||
Sbjct 825092 GCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTC 825151
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||| ||| ||| ||||| || | ||| | || ||||| ||||||||
Sbjct 825152 ACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTC 825211
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 825212 TTCACGAAGATCTGCATG 825229
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| |||||||| || |||||||| || || ||||| |||||| || || || |||
Sbjct 825260 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCA 825319
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | || | | ||| ||||| |||||||||||||| | ||| ||||| ||
Sbjct 825320 GCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTC 825379
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||| ||| ||| ||||| || | ||| | || ||||| ||||||||
Sbjct 825380 ACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTC 825439
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 825440 TTCACGAAGATCTGCATG 825457
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| |||||||| || |||||||| || || ||||| |||||| || || || |||
Sbjct 825488 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCA 825547
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | || | | ||| ||||| |||||||||||||| | ||| ||||| ||
Sbjct 825548 GCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTC 825607
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||| ||| ||| ||||| || | ||| | || ||||| ||||||||
Sbjct 825608 ACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTC 825667
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 825668 TTCACGAAGATCTGCATG 825685
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| |||||||| || |||||||| || || ||||| |||||| || || || |||
Sbjct 825716 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCA 825775
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | || | | ||| ||||| |||||||||||||| | ||| ||||| ||
Sbjct 825776 GCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTC 825835
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||| ||| ||| ||||| || | ||| | || ||||| ||||||||
Sbjct 825836 ACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTC 825895
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 825896 TTCACGAAGATCTGCATG 825913
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| |||||||| || |||||||| || || ||||| |||||| || || || |||
Sbjct 825944 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCA 826003
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | || | | ||| ||||| |||||||||||||| | ||| ||||| ||
Sbjct 826004 GCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTC 826063
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||| ||| ||| ||||| || | ||| | || ||||| ||||||||
Sbjct 826064 ACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTC 826123
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 826124 TTCACGAAGATCTGCATG 826141
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| |||||||| || |||||||| || || ||||| |||||| || || || |||
Sbjct 826172 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCA 826231
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | || | | ||| ||||| |||||||||||||| | ||| ||||| ||
Sbjct 826232 GCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTC 826291
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||| ||| ||| ||||| || | ||| | || ||||| ||||| ||
Sbjct 826292 ACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 826351
Query 114366 TTTACAAAAATCTGCATG 114383
|| ||||| |||||||||
Sbjct 826352 TTCACAAAGATCTGCATG 826369
>seq13
Length=12215238
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287
||||| || || || ||||| |||| || | ||| ||||| ||||||||||| || |||
Sbjct 3521360 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCCTCCTTG 3521419
Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347
|| ||||| || | | || | ||||||| ||| ||||| |||| ||| |
Sbjct 3521420 TCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAAGGTGATG 3521479
Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| ||||| ||||| || || ||||| |||||||||
Sbjct 3521480 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 3521515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420095520893916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |