Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq206 125 7e-24
seq13 109 5e-19
>seq206
Length=1612959
Score = 125 bits (138), Expect = 7e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || |||||||| || |||||||| || | | ||| ||| | |||
Sbjct 825017 AGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCT 825076
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || |||| | || ||||||||| |||||||| ||||| | ||
Sbjct 825077 TCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCC 825136
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | ||||| | || || || || | || | ||||
Sbjct 825137 TGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTC 825196
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| ||| || ||||| || |||||
Sbjct 825197 TTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825228
Score = 125 bits (138), Expect = 7e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || |||||||| || |||||||| || | | ||| ||| | |||
Sbjct 825245 AGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCT 825304
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || |||| | || ||||||||| |||||||| ||||| | ||
Sbjct 825305 TCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCC 825364
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | ||||| | || || || || | || | ||||
Sbjct 825365 TGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTC 825424
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| ||| || ||||| || |||||
Sbjct 825425 TTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825456
Score = 125 bits (138), Expect = 7e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || |||||||| || |||||||| || | | ||| ||| | |||
Sbjct 825473 AGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCT 825532
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || |||| | || ||||||||| |||||||| ||||| | ||
Sbjct 825533 TCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCC 825592
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | ||||| | || || || || | || | ||||
Sbjct 825593 TGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTC 825652
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| ||| || ||||| || |||||
Sbjct 825653 TTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825684
Score = 125 bits (138), Expect = 7e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || |||||||| || |||||||| || | | ||| ||| | |||
Sbjct 825701 AGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCT 825760
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || |||| | || ||||||||| |||||||| ||||| | ||
Sbjct 825761 TCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCC 825820
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | ||||| | || || || || | || | ||||
Sbjct 825821 TGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTC 825880
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| ||| || ||||| || |||||
Sbjct 825881 TTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825912
Score = 125 bits (138), Expect = 7e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || |||||||| || |||||||| || | | ||| ||| | |||
Sbjct 825929 AGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCT 825988
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || |||| | || ||||||||| |||||||| ||||| | ||
Sbjct 825989 TCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCC 826048
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | ||||| | || || || || | || | ||||
Sbjct 826049 TGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTC 826108
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| ||| || ||||| || |||||
Sbjct 826109 TTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 826140
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || |||||||| || |||||||| || | | ||| ||| | |||
Sbjct 826157 AGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCT 826216
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || |||| | || ||||||||| |||||||| ||||| | ||
Sbjct 826217 TCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCC 826276
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | ||||| | || || || || | || | ||||
Sbjct 826277 TGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTC 826336
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||||| |||| || || || || || ||||| ||
Sbjct 826337 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 826371
>seq13
Length=12215238
Score = 109 bits (120), Expect = 5e-19
Identities = 134/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 64264 GTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTG 64323
|||||| || | | ||||||| ||||||| ||||||||||| ||| | || |||| |||
Sbjct 3521335 GTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTG 3521394
Query 64324 CTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATC 64383
||||||||||||||| || || || || || || || ||| ||| ||| | || ||
Sbjct 3521395 CTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC 3521454
Query 64384 ACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || || || || | || | ||||||||| |||| || || || || || |||||
Sbjct 3521455 GCTGGGCTCGACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 3521514
Query 64444 TTT 64446
||
Sbjct 3521515 GTT 3521517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499597377462920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |