Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq206 122 2e-22
seq13 105 2e-17
>seq206
Length=1612959
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| |||||||| || || || || || |||| ||||||||||| || || | |||||
Sbjct 825016 CAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATC 825075
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || ||||| || | | ||||||||| ||| ||| ||||| | ||
Sbjct 825076 TTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTC 825135
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | ||| || | | || || || | ||||| ||
Sbjct 825136 CTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGT 825195
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || ||||| ||||| || || ||
Sbjct 825196 CTTGCCAGTCAGAGTCTTCACGAAGATCTG 825225
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| |||||||| || || || || || |||| ||||||||||| || || | |||||
Sbjct 825244 CAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATC 825303
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || ||||| || | | ||||||||| ||| ||| ||||| | ||
Sbjct 825304 TTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTC 825363
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | ||| || | | || || || | ||||| ||
Sbjct 825364 CTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGT 825423
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || ||||| ||||| || || ||
Sbjct 825424 CTTGCCAGTCAGAGTCTTCACGAAGATCTG 825453
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| |||||||| || || || || || |||| ||||||||||| || || | |||||
Sbjct 825472 CAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATC 825531
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || ||||| || | | ||||||||| ||| ||| ||||| | ||
Sbjct 825532 TTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTC 825591
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | ||| || | | || || || | ||||| ||
Sbjct 825592 CTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGT 825651
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || ||||| ||||| || || ||
Sbjct 825652 CTTGCCAGTCAGAGTCTTCACGAAGATCTG 825681
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| |||||||| || || || || || |||| ||||||||||| || || | |||||
Sbjct 825700 CAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATC 825759
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || ||||| || | | ||||||||| ||| ||| ||||| | ||
Sbjct 825760 TTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTC 825819
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | ||| || | | || || || | ||||| ||
Sbjct 825820 CTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGT 825879
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || ||||| ||||| || || ||
Sbjct 825880 CTTGCCAGTCAGAGTCTTCACGAAGATCTG 825909
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| |||||||| || || || || || |||| ||||||||||| || || | |||||
Sbjct 825928 CAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATC 825987
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || ||||| || | | ||||||||| ||| ||| ||||| | ||
Sbjct 825988 TTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTC 826047
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | ||| || | | || || || | ||||| ||
Sbjct 826048 CTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGT 826107
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || ||||| ||||| || || ||
Sbjct 826108 CTTGCCAGTCAGAGTCTTCACGAAGATCTG 826137
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| |||||||| || || || || || |||| ||||||||||| || || | |||||
Sbjct 826156 CAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATC 826215
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || ||||| || | | ||||||||| ||| ||| ||||| | ||
Sbjct 826216 TTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTC 826275
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | ||| || | | || || || | ||||| ||
Sbjct 826276 CTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGT 826335
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || |||||||| || ||
Sbjct 826336 CTTGCCAGTCAGGGTCTTCACAAAGATCTG 826365
>seq13
Length=12215238
Score = 105 bits (116), Expect = 2e-17
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
|||||||||||||||||| || |||||||| || | |||||| ||||| ||| || ||
Sbjct 3520981 TCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGAATGCCCTC 3521040
Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590
| ||||| ||||| ||| || ||| | |||||| | | || || ||||| ||
Sbjct 3521041 TTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCCACCTCCAAGGT 3521100
Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| |||||||| || || || |||||||| || ||
Sbjct 3521101 GATGGTCTTACCTGTCAGGGTCTTCACAAAGATCTG 3521136
Score = 104 bits (114), Expect = 6e-17
Identities = 138/191 (72%), Gaps = 3/191 (2%)
Strand=Plus/Plus
Query 199450 GTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTG 199509
||||||||| | || || | || |||||||||||||| || || ||||| || | |||
Sbjct 3521335 GTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTG 3521394
Query 199510 CTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569
|||||| ||| ||| || || ||||| ||||| ||| || |||| ||||||
Sbjct 3521395 CTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC 3521454
Query 199570 TGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTA 199629
| | || || ||||| ||||| ||||| ||||| || || |||||||| || ||
Sbjct 3521455 GCTGGGCTCGACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTG--- 3521511
Query 199630 CATTTTAGCCT 199640
||| || ||||
Sbjct 3521512 CATGTTTGCCT 3521522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178806908243731
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |