Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq37 89.7 1e-12
seq313 84.2 4e-11
>seq37
Length=6782005
Score = 89.7 bits (98), Expect = 1e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214
|| || | ||||||||| | |||||||| || |||||||| | ||||||| ||
Sbjct 2516351 TCATCTCTGCTGATGAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 2516410
Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273
||||| || || || ||||| ||||| |||||||||||||| || ||||| || || ||
Sbjct 2516411 AGCCAAAATATAGCAGCGAACGAGCCCGAGAAGAAGATGCCTTCGACTGCAGCAAAGGC 2516469
>seq313
Length=537090
Score = 84.2 bits (92), Expect = 4e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872
||||||| |||||| || || || | ||| || || ||| ||||| |||| | | |
Sbjct 217478 ACTCTCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCACGCTGC 217419
Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932
|| || |||| ||| || | || ||||| |||||||||||| ||||| |||
Sbjct 217418 TCTTCTTTCCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAGATGCCAAGGC 217359
Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963
|||| |||||||||||| || || || ||||
Sbjct 217358 TCCAGGTAGATGGCAAAAGCTCCAGGTCTCT 217328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931444385893120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |