Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq313 93.3 8e-14
seq37 87.8 3e-12
>seq313
Length=537090
Score = 93.3 bits (102), Expect = 8e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790
|||||| || ||| ||||||||| | || |||||||| || |||||||| ||||||||
Sbjct 218733 CACCTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGT 218674
Query 221791 CCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACC 221850
||||| || | ||||| ||| || ||| || ||||||||| ||||| | ||
Sbjct 218673 CCCCAAGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCCTTGTACAGCATGTAAGGTGT 218614
Query 221851 GCCAGTCTC 221859
|||||||||
Sbjct 218613 GCCAGTCTC 218605
>seq37
Length=6782005
Score = 87.8 bits (96), Expect = 3e-12
Identities = 96/125 (77%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
|| ||||||||||| || || |||||||| ||| || ||||| || || || || |||
Sbjct 2516472 GTTGCCTTTGCTGCAGTCGAAGGCATCTTCTTCTCGGGCTCGTTCGCTGCTATATTTTGG 2516413
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGA 26003
|| ||| ||| ||| ||||| || ||| ||||| ||||| || ||||||||||| ||
Sbjct 2516412 CTGAAGAAGAGGGGCCTGATGCCTGGACTG-ACTTTCTCCAATGAACTCATCAGCAGAGA 2516354
Query 26004 CGAGG 26008
||||
Sbjct 2516353 TGAGG 2516349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928756641017920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |