Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq313 93.3 8e-14 seq37 87.8 3e-12 >seq313 Length=537090 Score = 93.3 bits (102), Expect = 8e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790 |||||| || ||| ||||||||| | || |||||||| || |||||||| |||||||| Sbjct 218733 CACCTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGT 218674 Query 221791 CCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACC 221850 ||||| || | ||||| ||| || ||| || ||||||||| ||||| | || Sbjct 218673 CCCCAAGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCCTTGTACAGCATGTAAGGTGT 218614 Query 221851 GCCAGTCTC 221859 ||||||||| Sbjct 218613 GCCAGTCTC 218605 >seq37 Length=6782005 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/125 (77%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || ||||||||||| || || |||||||| ||| || ||||| || || || || ||| Sbjct 2516472 GTTGCCTTTGCTGCAGTCGAAGGCATCTTCTTCTCGGGCTCGTTCGCTGCTATATTTTGG 2516413 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGA 26003 || ||| ||| ||| ||||| || ||| ||||| ||||| || ||||||||||| || Sbjct 2516412 CTGAAGAAGAGGGGCCTGATGCCTGGACTG-ACTTTCTCCAATGAACTCATCAGCAGAGA 2516354 Query 26004 CGAGG 26008 |||| Sbjct 2516353 TGAGG 2516349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928756641017920