Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq171 251 8e-62
seq25 176 5e-39
>seq171
Length=1966995
Score = 251 bits (278), Expect = 8e-62
Identities = 610/916 (67%), Gaps = 7/916 (1%)
Strand=Plus/Plus
Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106
||||| | || ||| |||| ||||| || || || ||| || || || || |||
Sbjct 234447 TGTCGTAAATATTCTTCCAAACATTTCACTGCAAAAGGGTCGACATCAGTATCAAACTTA 234506
Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166
|| || || | |||||| ||| | || ||||| | || ||||| |||||||||
Sbjct 234507 TTAGCAAAGAAGTGGTGAT--TTC-GCAGCATCCATTTCAGATCTCCTACCCCGAACACA 234563
Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226
||||| || || | || || || |||| || ||||| | || ||||| | ||| ||
Sbjct 234564 CAGACAGACCGAACATGAACTCCACTGCACGGTGGGTAGGGTGCACCTTTAGACACATCT 234623
Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286
||||| |||||||||| || ||||||||||| | || | ||| || || ||||||
Sbjct 234624 CCTTCAAAGTACTGCCATTTGACAAACCTGGCCAGTGCATTCATATCAGAAACGTCGTAC 234683
Query 160287 TTGTACATCAGGGGAA-CGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAG 160345
|||| || || ||| |||||||||| || | || || | ||| | || ||||||||
Sbjct 234684 TTGT-CACTAGAAGAAACGGCACCGGGGACTTCAGGGATTCTCTGAATCGTTGCCCACAG 234742
Query 160346 GTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTC 160405
|| ||| || |||||||| ||||| || | ||| || || || | |||| |||
Sbjct 234743 GTATTCATCAGGGCTGTAAGTGTCTTTTGCCCACTCGATAAATTTGAGGATTTTGCTGCT 234802
Query 160406 CCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATAT 160465
| | || || | |||| | || ||||| || || || || || || ||
Sbjct 234803 TTCTAATATATGTTCTACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAAAAT 234862
Query 160466 CGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCAC 160525
|| | | ||| ||| | |||||| ||| ||||| ||| || | |
Sbjct 234863 TGGAGTACTGAGAGGTGGCAGTTGTTTGTCTATACCTGTGTTCTTTACCTTACCATCAAT 234922
Query 160526 CAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAG 160585
| | | | | || |||||||| || || | ||||| ||| ||||| |
Sbjct 234923 AATCTCATAGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCTGTCTCCAA 234982
Query 160586 ACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGG 160645
||||| |||| | || | ||||| | || || || || |||| ||||| | ||
Sbjct 234983 GCTGTTTTCACCTTTAAGGGCTTTCAATTTCTCTACTATTTCCTGGTTGGTCTTTATAGG 235042
Query 160646 AAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTC 160705
|||||| | || || | |||||| | ||| ||||| || | || || || ||
Sbjct 235043 AAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAACTTCTTCTGTAGAGATC 235102
Query 160706 CCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAG 160765
||||||||||||||||||||||||| | |||||| ||||| || || || ||||||
Sbjct 235103 TTTCATGCAATTAATATCTGCCTGCACCCTGCTCCATGAAGCATATACAACACTCTCTAA 235162
Query 160766 TTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAA 160825
| |||| | |||||| ||||| ||||| || || ||||| ||| | ||| || ||
Sbjct 235163 CTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCTTTCACAG-CAGTAAAAA 235221
Query 160826 CATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGG 160884
|| | | ||||| ||| || || | ||| || || |||||||| |||||||| |
Sbjct 235222 AGGATTCTGGAGACTTTCTGTCTACATGGATGCAGTAAAGATTCTGAGGAGCGTAGATAG 235281
Query 160885 CCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCG 160944
|| || | || || | |||||| || || |||| | ||| || ||||| || || |
Sbjct 235282 ATCTTAGAAGTCTATCAAGCATCTCGATTTTGTGATAAACCACTATCGAGTAAGCAATTG 235341
Query 160945 GAAACTCGGTCTCCTC 160960
|||| || | |||||
Sbjct 235342 GAAATTCTGCTTCCTC 235357
>seq25
Length=8201792
Score = 176 bits (194), Expect = 5e-39
Identities = 604/932 (65%), Gaps = 36/932 (4%)
Strand=Plus/Minus
Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103
||||| ||||| || || || || || |||| |||| |||| || | ||||||
Sbjct 6011002 CTGTGGCGCAGGTGCTCCTCGAGGCACTGGATGGCGGCATCGTCCACCTGGGGGTCGAAC 6010943
Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163
|| || || || || ||||| | | | || |||||| |||||||||| |||| |
Sbjct 6010942 TTGTTGGCCAAGAGGTGGTGC---TGCCGGAGCATCCAGGACACGTCTCCGACCCCGTAG 6010886
Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223
| |||||||| || || | |||| |||| |||||||| | ||||| || |
Sbjct 6010885 ATGCAGACGGCGCGCTGGTACCGGCCGGTGCAGGGCGGGTAGGGCGCTCCCTTGCTGGTG 6010826
Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283
|| || || ||||||||| || || | | || | || | |||||| ||| |||
Sbjct 6010825 TCGCCCTCCAGGTACTGCCATTTGACCAGGCGGGGCAGGGCGTTCATGTCCGAGAGCTCG 6010766
Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343
| |||| | |||| | ||| || || ||||| |||| ||| ||||| |||||
Sbjct 6010765 AACTTGTCGTTGTGGGGCATGGCGCCCGGCACGCCAGGCACACGGGTGAGGGTAGCCCAG 6010706
Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403
| ||| |||||||||||||| |||||||| | ||| |||| |||| | | |
Sbjct 6010705 ACGTGCTCGTCGGGGCTGTAGGTGTCCTTGGCCCACTCCAGAAACTGCAGCACTGTGGGG 6010646
Query 160404 TCC-CGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAA 160462
||| || || | ||| ||| ||| | ||||| ||| |||||||||||| | |||
Sbjct 6010645 TCCTCGAAG-ATGTGCTGCACGAAGGCCCGCGTCACCGCAATGTACGCGCTGCCCGTGAA 6010587
Query 160463 TATCGG------TATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCAC 160516
|| || | ||| ||| || | || || || || || || |
Sbjct 6010586 CATGGGCGAGCTGAGCGGTGACGGCAGCTTCTCGGTG----GA--TGTCTTGGA---GAT 6010536
Query 160517 TCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGT---GCGGTGGCATGCG 160573
| | | ||| |||| | | |||||||| | | ||||| || |||| |
Sbjct 6010535 GGCATCCCCCACTTCGTGGTGGTACTTCCACCGCAGCTGCTTGTAGGACGATGGCTT--- 6010479
Query 160574 TTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTT 160633
|||| ||| | ||||| || | ||| | || ||| ||||| ||
Sbjct 6010478 CTCCGACTCCATGCTGTTCTGCCCCTGCAGCATCTGGAGGGCGCGGACCATCTCCGCATT 6010419
Query 160634 CGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTC---GCGCT 160690
|| |||| || |||||||| ||||| ||| | ||||| | ||| | | |||
Sbjct 6010418 GGTTTTGATGGGGAAGTCGGTGCCGCAGGTGTTGAGGACGTAGTGCCACGGCACGGGGCT 6010359
Query 160691 CAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTA 160750
| | |||||||| |||||| || | || ||||||| ||| |||||| || ||
Sbjct 6010358 C---TGCAGCAGGTCCTGCATGCAGTTGAGGTCAGCCTGCAGGCGTGACCAGGAGGCATA 6010302
Query 160751 CACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCAC 160810
|| |||||||| || ||||||||||||||||| ||| || | |||| ||
Sbjct 6010301 GACCACGTTCTCCAGGCGGCTGGCCACAAAGACGTTGGGGAAGCAGGCGGCGATGGCCCT 6010242
Query 160811 CACCGCCAGAAAGAA--CATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTC 160868
||| ||| ||| || || | ||| | ||||| ||| || || || | |||
Sbjct 6010241 CACGGCCTCCTGGAAGGCAGCT--GGGGACTTGCTGTCCATGTGGACACAGTAGACATTC 6010184
Query 160869 TGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACG 160928
|| ||| |||||| | || || | || |||||||||||| || || | ||||| ||
Sbjct 6010183 TGTGGCACGTAGACAGACCGCAGGAGCCGCTCGAACATCTCGATTTTGTTGTGGATGACT 6010124
Query 160929 ATAGAGTAGGCTATCGGAAACTCGGTCTCCTC 160960
|| |||||||| || |||||||||| ||||||
Sbjct 6010123 ATGGAGTAGGCAATGGGAAACTCGGCCTCCTC 6010092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577164414682680
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