Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq5 219 7e-51
seq412 183 5e-40
seq347 161 2e-33
seq115 141 1e-27
seq11 105 1e-16
seq498 100 5e-15
seq37 86.0 1e-10
>seq5
Length=15909697
Score = 219 bits (242), Expect = 7e-51
Identities = 202/256 (79%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 158091 TGTACTTGGTGACCGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 158032
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| || ||||||||| |
Sbjct 158031 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTCGAGCGCTTGTTGTAGT 157972
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 157971 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 157912
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 157911 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 157852
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 157851 ACACGTAGATCGAGTA 157836
Score = 215 bits (238), Expect = 8e-50
Identities = 194/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 139581 TGTACTTGGTGACCGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 139640
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| || ||||||||| |
Sbjct 139641 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTCGAGCGCTTGTTGTAGT 139700
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 139701 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 139760
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 139761 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 139820
Query 1485710 AAAC 1485713
| ||
Sbjct 139821 ACAC 139824
Score = 215 bits (238), Expect = 8e-50
Identities = 194/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 226545 TGTACTTGGTGACCGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 226486
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| || ||||||||| |
Sbjct 226485 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTCGAGCGCTTGTTGTAGT 226426
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 226425 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 226366
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 226365 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 226306
Query 1485710 AAAC 1485713
| ||
Sbjct 226305 ACAC 226302
Score = 215 bits (238), Expect = 8e-50
Identities = 194/244 (80%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 234281 TGTACTTGGTGACCGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 234222
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| || ||||||||| |
Sbjct 234221 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTCGAGCGCTTGTTGTAGT 234162
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 234161 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 234102
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 234101 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 234042
Query 1485710 AAAC 1485713
| ||
Sbjct 234041 ACAC 234038
Score = 205 bits (226), Expect = 1e-46
Identities = 199/256 (78%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 169534 TGTACTTGGTGACCGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 169593
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| || ||||||||| |
Sbjct 169594 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTCGAGCGCTTGTTGTAGT 169653
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| || | ||||||||||| || || ||||
Sbjct 169654 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCAAAGATGTCGTTGACGAAAGAATTCA 169713
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||| |||||||||||||| ||||||||||
Sbjct 169714 TGATACTCATGGCTTTAGATGAGATGCCCGTGTCAGGGTGCACCTGCTTCAGCACCTTGT 169773
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 169774 ACACGTAGATCGAGTA 169789
Score = 168 bits (186), Expect = 1e-35
Identities = 193/256 (75%), Gaps = 10/256 (4%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 176158 TGTACTTGGTGACCGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 176099
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|||| ||| || | | ||| ||| | |||| ||||||||| |
Sbjct 176098 G---CAGGAGCAGGGACG-CACCCTCTA-CGGCT-----TCGTCGAGCGCTTGTTGTAGT 176049
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| |||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 176048 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 175989
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 175988 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 175929
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 175928 ACACGTAGATCGAGTA 175913
Score = 87.8 bits (96), Expect = 3e-11
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 1485628 ATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGG 1485687
||||||||||| || ||||||||||| ||| | ||| ||||||||| |||||||
Sbjct 251290 ATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGG 251349
Query 1485688 TGCACCTGCTTGAGCACCTTGTAAAC 1485713
||||||||||| ||||||||||| ||
Sbjct 251350 TGCACCTGCTTCAGCACCTTGTACAC 251375
>seq412
Length=194236
Score = 183 bits (202), Expect = 5e-40
Identities = 187/244 (77%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||| |||||||| |||||||| || || ||||| |||||| ||||||| || || |||
Sbjct 79947 TGTATTTGGTGACCGCCTTGGTGCCTTCGGAGACAGCGTGCTTGGCCAGCTCACCAGGCA 80006
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| |||||||| ||||||||||| |||| | ||| ||| |||||||||
Sbjct 80007 GCAACAGCCGCACGGCAGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 80066
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||| ||||||| |||| ||||| ||||| || || ||||
Sbjct 80067 GCGCCAGGCGCGAAGCCTCCCCCGCGATGCGCTCGAAGATGTCATTGACGAAGGAATTCA 80126
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
||||| ||| | || |||||||||| ||| |||||||||||||| ||||||||||
Sbjct 80127 TGATCCCCATAGCCTTAGAGGAGATGCCCGTGTCTGGGTGCACCTGCTTCAGCACCTTGT 80186
Query 1485710 AAAC 1485713
| ||
Sbjct 80187 ACAC 80190
>seq347
Length=350341
Score = 161 bits (178), Expect = 2e-33
Identities = 174/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||| |||
Sbjct 158438 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCAGGCA 158379
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || ||||| || ||||| | ||||||| || ||| ||| ||| | ||| || |
Sbjct 158378 GCAGGAGCCGCACAGCCGTCTGCACCTCGCGGCTGGTGATGGTGGAGCGGTGGTT-GTAC 158320
Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
| |||||||| |||||| | | | || |||| ||||| |||||||| ||||||
Sbjct 158319 TGGGCCAGGCGTGAGGCCTCTGAAGCCAGCCGCTCGAAGATGTCATTGACAAAGGAGTTC 158260
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1485696
||||| ||| | ||| ||||||||| ||| ||||||||||||
Sbjct 158259 ATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCAGGGTGCACCTGC 158212
>seq115
Length=2931561
Score = 141 bits (156), Expect = 1e-27
Identities = 183/247 (74%), Gaps = 12/247 (5%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| |||||||||||||||||| ||||||| || || | |
Sbjct 1868523 TGTACTTGGTGACAGCCTTGGTGCCCTCTGAGACGGCGTGCTTGGCCAGCTCCCCCGGGA 1868582
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587
| |||||||||||| ||||||||||| || | | ||| ||| |||||||| ||||
Sbjct 1868583 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 1868642
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT- 1485646
|||| | | | ||| || | | |||| || | | ||| || | ||||
Sbjct 1868643 GCGCTCAA---AGTTTGCC----TGACAGTTAGGTC-TTCCTCACATTGTCATA-GAGTA 1868693
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
||||||| ||| | ||| ||||||||| ||||||||| |||||||| |||||||
Sbjct 1868694 TCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCT 1868753
Query 1485707 TGTAAAC 1485713
|||| ||
Sbjct 1868754 TGTAGAC 1868760
>seq11
Length=12384036
Score = 105 bits (116), Expect = 1e-16
Identities = 91/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362
|||||||| || ||||| ||||| ||||||||||| |||||||||| ||| || |||
Sbjct 4519475 ACCTCCTCCGCCGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGG 4519416
Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
|| |||||||||| | || ||||| ||||||||| || |||||||||||
Sbjct 4519415 TACTGGATGGGGAAGACGACGAAGCGGCGGGGGTTCTCCCGCAGCAGCGGCTC 4519363
>seq498
Length=60077
Score = 100 bits (110), Expect = 5e-15
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081
||||||||||||||||| ||| ||||| ||| | |||||||| | | |||| |
Sbjct 5562 CCCGAGAGCCGCGGCTTCGTGGAGAACTCCTACCTGGCCGGCCTCACCCCAACCGAGTTC 5503
Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141
|| | ||| || ||||| |||||||| ||| ||||||| ||||||||||||||||||
Sbjct 5502 TTCTTCCACGCCATGGGCGGCCGCGAGGGGCTCATCGACACCGCCGTCAAGACGGCCGAG 5443
Query 431142 ACGGG 431146
|| ||
Sbjct 5442 ACCGG 5438
>seq37
Length=6782005
Score = 86.0 bits (94), Expect = 1e-10
Identities = 89/115 (77%), Gaps = 4/115 (3%)
Strand=Plus/Plus
Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATA--TCCGTT 796360
|||||||| || |||||||||||||||| ||||| ||||||||| | ||||| ||||
Sbjct 2522167 ACCTCCTCCGCCGTCCAAAAGGAGGCCTGGGCCTGTTTGTACATTTTCCATATGTCCG-- 2522224
Query 796361 GGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
|||| |||||||||| | || ||||| |||||| | | || || |||||
Sbjct 2522225 GGTACTGGATGGGGAAGATGACGAAGCGGCGGGGGTTTTTTCTGAGAAGAGGCTC 2522279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915438697958327
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