Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq314 132 9e-26
>seq314
Length=515724
Score = 132 bits (146), Expect = 9e-26
Identities = 126/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438
|| ||||||||||| ||| | || ||||| || |||||||| |||||||| || |||||
Sbjct 377150 GCTTTATGGTGGTATTATGTCTCCAAAGGAATTGAATACTTGGATACAGTATTCTTCATC 377209
Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498
|| ||||| || ||||| || |||| || || || || ||||| ||||| || |||||
Sbjct 377210 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 377269
Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
||||| | ||| | |||||||| ||| ||||||| || ||
Sbjct 377270 ACTTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 377310
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600
|| ||||| || |||||| ||||| | ||||| ||||| |||||||| | ||||||||
Sbjct 379036 GCTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTCATTATGTACATGTATTATGGA 379095
Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660
| || || ||||| | || ||| | || || | |||||||| || ||| | || |||
Sbjct 379096 TTAGCTGCCTGTGGCCCTAAATTTCAGAAATACCTGTGGTGGAAACGATACTTGACCATA 379155
Query 58661 ATGCAATTGGTA 58672
|||||||||||
Sbjct 379156 TTGCAATTGGTA 379167
Score = 86.0 bits (94), Expect = 1e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 58669 GGTACAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTT 58728
||| || |||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 379858 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 379917
Query 58729 TCCAAAATGGACGCAATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGG 58788
|| ||||||| ||| ||| || || ||||| || | || || || || |||||||
Sbjct 379918 CCCTAAATGGATGCACTGGGGTGTAATTTTCTATGCTGTCACCTTCATTTTCCTGTTTGG 379977
Query 58789 TAACTTCTATTTTAGAACATACAAG 58813
||||||||| | | | ||||| |||
Sbjct 379978 TAACTTCTACTATCGGACATATAAG 380002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903325454984480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |