Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq206 138 1e-27
seq13 127 2e-24
seq313 104 2e-17
>seq206
Length=1612959
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| |||||||| || ||||| || || || | || || |||||||||||
Sbjct 825031 GGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCC 825090
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | || ||||||||| ||||| |||||||||| ||| |||||| |||
Sbjct 825091 AGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTT 825150
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| || ||| ||||||| || || | ||||| ||| ||||| ||||||||
Sbjct 825151 CACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 825210
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 825211 CTTCACGAAGATCTGCATG 825229
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| |||||||| || ||||| || || || | || || |||||||||||
Sbjct 825259 GGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCC 825318
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | || ||||||||| ||||| |||||||||| ||| |||||| |||
Sbjct 825319 AGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTT 825378
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| || ||| ||||||| || || | ||||| ||| ||||| ||||||||
Sbjct 825379 CACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 825438
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 825439 CTTCACGAAGATCTGCATG 825457
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| |||||||| || ||||| || || || | || || |||||||||||
Sbjct 825487 GGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCC 825546
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | || ||||||||| ||||| |||||||||| ||| |||||| |||
Sbjct 825547 AGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTT 825606
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| || ||| ||||||| || || | ||||| ||| ||||| ||||||||
Sbjct 825607 CACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 825666
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 825667 CTTCACGAAGATCTGCATG 825685
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| |||||||| || ||||| || || || | || || |||||||||||
Sbjct 825715 GGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCC 825774
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | || ||||||||| ||||| |||||||||| ||| |||||| |||
Sbjct 825775 AGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTT 825834
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| || ||| ||||||| || || | ||||| ||| ||||| ||||||||
Sbjct 825835 CACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 825894
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 825895 CTTCACGAAGATCTGCATG 825913
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| |||||||| || ||||| || || || | || || |||||||||||
Sbjct 825943 GGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCC 826002
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | || ||||||||| ||||| |||||||||| ||| |||||| |||
Sbjct 826003 AGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTT 826062
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| || ||| ||||||| || || | ||||| ||| ||||| ||||||||
Sbjct 826063 CACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 826122
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 826123 CTTCACGAAGATCTGCATG 826141
Score = 129 bits (142), Expect = 6e-25
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| |||||||| || ||||| || || || | || || |||||||||||
Sbjct 826171 GGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCC 826230
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | || ||||||||| ||||| |||||||||| ||| |||||| |||
Sbjct 826231 AGCGAAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTT 826290
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| || ||| ||||||| || || | ||||| ||| ||||| ||||| ||
Sbjct 826291 CACATTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGT 826350
Query 133643 TTTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 826351 CTTCACAAAGATCTGCATG 826369
>seq13
Length=12215238
Score = 127 bits (140), Expect = 2e-24
Identities = 136/180 (76%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 133482 TTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGC 133541
||||| ||| || ||| | ||| || ||||||||||| || | || |||| ||||
Sbjct 3521336 TTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGC 3521395
Query 133542 TGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCG 133601
||||||||||| ||||| |||||||| |||||| ||||| | ||| | ||||||
Sbjct 3521396 TGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCG 3521455
Query 133602 GTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661
||||||| || || | ||||| ||| ||||| ||||| || || || || |||||||||
Sbjct 3521456 CTGGGCTCGACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 3521515
Score = 111 bits (122), Expect = 2e-19
Identities = 118/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || ||||||||||| ||| | || |||| |||||| || || || ||||| || |||
Sbjct 3520985 TCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGAATGCCCTCTTTG 3521044
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | |||| |||||| |||||||||| || | ||||| |
Sbjct 3521045 TCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCCACCTCCAAGGTGATG 3521104
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661
|| || || ||||| || || || || |||||||||
Sbjct 3521105 GTCTTACCTGTCAGGGTCTTCACAAAGATCTGCATG 3521140
>seq313
Length=537090
Score = 104 bits (114), Expect = 2e-17
Identities = 89/110 (81%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925
||||| || || || | |||||||||||||||||||| |||| ||||| ||||||
Sbjct 218714 TACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 218655
Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
||||| | |||||| | |||||||||||||||||| ||| |||||| ||
Sbjct 218654 CTCTTCCGGTTGCAAGAGTCCTTGTACAGCATGTAAGGTGTGCCAGTCTC 218605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483374917323320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |