Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq206 89.7 3e-13 >seq206 Length=1612959 Score = 89.7 bits (98), Expect = 3e-13 Identities = 162/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | ||| | || || ||| ||||| || |||||||| || || Sbjct 826142 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 826201 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| || || || || |||||||| | |||||| || | || Sbjct 826202 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 826261 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| | ||| || || |||| ||| ||| ||| ||||| | || || Sbjct 826262 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCA-CATTCTCAATGGTATCGCTGGGCTCGAC 826320 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 |||| ||||| || || || || | || || |||||||||||||| |||| Sbjct 826321 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT-GTTG 826372 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | ||| | || || ||| ||||| || |||||||| || || Sbjct 825230 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825289 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| || || || || |||||||| | |||||| || | || Sbjct 825290 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825349 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| | ||| || || |||| ||| ||| ||| ||||| | || || Sbjct 825350 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCA-CATTCTCAATGGTATCGCTGGGCTCGAC 825408 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || || ||||||||||| Sbjct 825409 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825456 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | ||| | || || ||| ||||| || |||||||| || || Sbjct 825458 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825517 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| || || || || |||||||| | |||||| || | || Sbjct 825518 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825577 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| | ||| || || |||| ||| ||| ||| ||||| | || || Sbjct 825578 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCA-CATTCTCAATGGTATCGCTGGGCTCGAC 825636 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || || ||||||||||| Sbjct 825637 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825684 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | ||| | || || ||| ||||| || |||||||| || || Sbjct 825686 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825745 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| || || || || |||||||| | |||||| || | || Sbjct 825746 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825805 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| | ||| || || |||| ||| ||| ||| ||||| | || || Sbjct 825806 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCA-CATTCTCAATGGTATCGCTGGGCTCGAC 825864 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || || ||||||||||| Sbjct 825865 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825912 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | ||| | || || ||| ||||| || |||||||| || || Sbjct 825914 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825973 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| || || || || |||||||| | |||||| || | || Sbjct 825974 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 826033 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| | ||| || || |||| ||| ||| ||| ||||| | || || Sbjct 826034 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCA-CATTCTCAATGGTATCGCTGGGCTCGAC 826092 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || || ||||||||||| Sbjct 826093 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 826140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328673581834560