Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq313 95.1 1e-14
seq206 82.4 7e-11
>seq313
Length=537090
Score = 95.1 bits (104), Expect = 1e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564
|||| ||| ||||| | ||||| ||||||||||| ||| ||||| || |||||||||
Sbjct 218714 TACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 218655
Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 147614
|| ||||| ||||| | ||| ||| | |||||||| ||| ||| |||||
Sbjct 218654 CTCTTCCGGTTGCAAGAGTCCTTGTACAGCATGTAAGGTGTGCCAGTCTC 218605
>seq206
Length=1612959
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || ||||||||||| || ||||||| |||||| ||||| || || |
Sbjct 825035 GATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCAGCG 825094
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || | | ||| || || ||||| |||||||| | || || || ||||
Sbjct 825095 AAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTCACA 825154
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | |||||| | ||||| || || | || | || || ||||||||||| ||
Sbjct 825155 TTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTC 825214
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 825215 ACGAAGATCTGCATG 825229
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || ||||||||||| || ||||||| |||||| ||||| || || |
Sbjct 825263 GATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCAGCG 825322
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || | | ||| || || ||||| |||||||| | || || || ||||
Sbjct 825323 AAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTCACA 825382
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | |||||| | ||||| || || | || | || || ||||||||||| ||
Sbjct 825383 TTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTC 825442
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 825443 ACGAAGATCTGCATG 825457
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || ||||||||||| || ||||||| |||||| ||||| || || |
Sbjct 825491 GATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCAGCG 825550
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || | | ||| || || ||||| |||||||| | || || || ||||
Sbjct 825551 AAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTCACA 825610
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | |||||| | ||||| || || | || | || || ||||||||||| ||
Sbjct 825611 TTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTC 825670
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 825671 ACGAAGATCTGCATG 825685
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || ||||||||||| || ||||||| |||||| ||||| || || |
Sbjct 825719 GATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCAGCG 825778
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || | | ||| || || ||||| |||||||| | || || || ||||
Sbjct 825779 AAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTCACA 825838
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | |||||| | ||||| || || | || | || || ||||||||||| ||
Sbjct 825839 TTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTC 825898
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 825899 ACGAAGATCTGCATG 825913
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || ||||||||||| || ||||||| |||||| ||||| || || |
Sbjct 825947 GATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTGCCAGCG 826006
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || | | ||| || || ||||| |||||||| | || || || ||||
Sbjct 826007 AAAATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTGGTCCTGGATCTTGGCCTTCACA 826066
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | |||||| | ||||| || || | || | || || ||||||||||| ||
Sbjct 826067 TTCTCAATGGTATCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTC 826126
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 826127 ACGAAGATCTGCATG 826141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476565963639480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |