Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq206 95.1 1e-14
seq313 86.0 6e-12
>seq206
Length=1612959
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || |||| ||| ||||| || |||||||| || || |||||||||||
Sbjct 825230 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825289
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || |||||||| | |||||| || || ||
Sbjct 825290 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825349
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| | || || || || || || || | || ||| | || ||
Sbjct 825350 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 825409
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | ||| || ||||| || |||||
Sbjct 825410 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825456
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || |||| ||| ||||| || |||||||| || || |||||||||||
Sbjct 825458 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825517
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || |||||||| | |||||| || || ||
Sbjct 825518 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825577
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| | || || || || || || || | || ||| | || ||
Sbjct 825578 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 825637
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | ||| || ||||| || |||||
Sbjct 825638 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825684
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || |||| ||| ||||| || |||||||| || || |||||||||||
Sbjct 825686 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825745
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || |||||||| | |||||| || || ||
Sbjct 825746 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825805
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| | || || || || || || || | || ||| | || ||
Sbjct 825806 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 825865
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | ||| || ||||| || |||||
Sbjct 825866 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825912
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || |||| ||| ||||| || |||||||| || || |||||||||||
Sbjct 825914 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825973
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || |||||||| | |||||| || || ||
Sbjct 825974 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 826033
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| | || || || || || || || | || ||| | || ||
Sbjct 826034 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 826093
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | ||| || ||||| || |||||
Sbjct 826094 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 826140
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || |||| ||| ||||| || |||||||| || || |||||||||||
Sbjct 825002 CCACCCCTCAGGCGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 825061
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || |||||||| | |||||| || || ||
Sbjct 825062 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 825121
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| | || || || || || || || | || ||| | || ||
Sbjct 825122 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 825181
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | ||| || ||||| || |||||
Sbjct 825182 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 825228
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || |||| ||| ||||| || |||||||| || || |||||||||||
Sbjct 826142 CCACCTCTCAGACGCAGCACAAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 826201
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || |||||||| | |||||| || || ||
Sbjct 826202 AGGGTACGCCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCAGGAGGA 826261
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| | || || || || || || || | || ||| | || ||
Sbjct 826262 ATGCCTTCCTGGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACC 826321
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || ||||| || || || | || || || || || ||||| |||
Sbjct 826322 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTG 826372
>seq313
Length=537090
Score = 86.0 bits (94), Expect = 6e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291
|||||| ||||||| || | || || || | || |||||||||||||| ||| ||||
Sbjct 218583 CGCCATCATCGAATCCCAGACAGAGACTGGCACACCTTACATGCTGTACAAGGACTCTTG 218642
Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351
|||| || |||||||| ||| |||| ||||| |||||||||||||| | ||
Sbjct 218643 CAACCGGAAGAGCAATCAGCAGAACTTGGGGACCATCAAATGCAGCAATCTGTGTACAGA 218702
Query 8352 AATTGTACAGTA 8363
||| || ||||
Sbjct 218703 AATAGTGGAGTA 218714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505350431374360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |