Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq60 107 2e-18
seq37 86.0 5e-12
>seq60
Length=5294655
Score = 107 bits (118), Expect = 2e-18
Identities = 118/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106
||||||| ||||||||||||||| | || ||||| || ||| || || ||| |||
Sbjct 699368 TGATGGCTTTGCCACCTTGTCATGCCCTTTGCCAGTTCTATGTTCTAAACGGAGAATTGT 699309
Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166
| || ||| | ||||| || || || || ||||||||||| || || || || || || |
Sbjct 699308 CTTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCA 699249
Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203
| ||| | |||||||| || |||||||| || || ||
Sbjct 699248 GCTATTCGCTGCTCACATACATGATTGCCCATGTCAC 699212
>seq37
Length=6782005
Score = 86.0 bits (94), Expect = 5e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 43928 CCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987
|||||||| || ||||| ||||| ||||| ||| ||| || || |||| |||||||||
Sbjct 2519798 CCAGAAGCTCGCTGTTTCTATGGCTTTCAGATTCTCATTGAGAACGTTCACTCGGAAATG 2519739
Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGA 44019
||||| | || ||||| || |||||||||||
Sbjct 2519738 TACAGCTTGCTTATAGACACTTACATCAAAGA 2519707
Score = 82.4 bits (90), Expect = 6e-11
Identities = 100/136 (74%), Gaps = 3/136 (2%)
Strand=Plus/Minus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || |||||||| ||||| |||||||| ||||||| |||||||| || ||||| |
Sbjct 2511834 AAAATCCTTTTGATTTCATGGAGAATATTTCTCTGGAAGGAAAAACAAATTTCTTTGAGA 2511775
Query 44553 AACGCGTTGGAGAATATCAGCGAATGGGCGTCATG---ATAACAAGTGACAATAAATTTA 44609
| || ||| ||||||||||| | | || ||| ||||| ||||| || |
Sbjct 2511774 AGCGGGTTTCGGAATATCAGCGTTTTGCTGTTATGGCAGAAACAATGGACAACGTTTTCA 2511715
Query 44610 CTACGGATGAAGATTT 44625
|| ||||| ||||||
Sbjct 2511714 CTCTGGATGCAGATTT 2511699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397419219545965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |