Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq25 259 6e-64 >seq25 Length=8201792 Score = 259 bits (286), Expect = 6e-64 Identities = 616/927 (66%), Gaps = 12/927 (1%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || |||||| ||| |||| |||||||||||| |||||||| || || |||||| |||| Sbjct 6010080 CCACTGAGCAAGGAGGAGGCCGAGTTTCCCATTGCCTACTCCATAGTCATCCACAACAAA 6010139 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 ||||||||||||||||| |||||| || | |||||| || ||||| ||||||| ||| Sbjct 6010140 ATCGAGATGTTCGAGCGGCTCCTGCGGTCTGTCTACGTGCCACAGAATGTCTACTGTGTC 6010199 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGC 13850 ||| ||||| ||||||| | | ||| || ||| |||||||||| ||| Sbjct 6010200 CACATGGACAGCAAGTCCCCAGCTGCCTTCCAGGAGGCCGTGAGGGCCATCGCCGCCTGC 6010259 Query 13851 TTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGC 13910 ||||| ||||| ||||| ||| ||| | ||||||| || | ||||||| ||| Sbjct 6010260 TTCCCCAACGTCTTTGTGGCCAGCCGCCTGGAGAACGTGGTCTATGCCTCCTGGTCACGC 6010319 Query 13911 GTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTAC 13970 ||||||| ||||||| ||||||| ||||||| |||||| |||| ||| Sbjct 6010320 CTGCAGGCTGACCTCAACTGCATGCAGGACCTGCTGCAGAGCCCCGTGCCGTGGCACTAC 6010379 Query 13971 CTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCG 14030 | |||||| ||||| | |||||||| |||| ||||| |||||| || || || Sbjct 6010380 GTCCTCAACACCTGCGGCACCGACTTCCCCATCAAAACCAATGCGGAGATGGTCCGCGCC 6010439 Query 14031 CTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCAT-GCCCAACCACAAG 14087 || || ||| || ||||| | ||||| | || | ||| | || || | || Sbjct 6010440 CTCCAGATGCTGCAGGGGCAGAACAGCATGGAGTCGGAGAAGCCATCGTCCTACAAGCAG 6010499 Query 14088 CTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGC 14147 |||| | | || | | |||| ||| || | | | ||| || | Sbjct 6010500 CTGCGGTGGA--AGTACCA-CCACGAAGTG------GGGGATGCCATCTCCAAGACATCC 6010550 Query 14148 AGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCG 14207 | | ||| ||| | |||||||| ||||| || |||| | ||| ||| ||||| Sbjct 6010551 ACCGAGAAGCTGCCGTCACCGCTCAGCTCGCCCATGTTCACGGGCAGCGCGTACATTGCG 6010610 Query 14208 GTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCAC 14267 || || |||| |||||| | | || || ||||| | ||| | | | || | Sbjct 6010611 GTGACGCGGGCCTTCGTGCAGCACATCTTCGAGGACCCCACAGTGCTGCAGTTTCTGGAG 6010670 Query 14268 TGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC 14327 ||| | ||||||| |||||||||||||||||| | ||||| ||| | | || Sbjct 6010671 TGGGCCAAGGACACCTACAGCCCCGACGAGCACGTCTGGGCTACCCTCACCCGTGTGCCT 6010730 Query 14328 GGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAG 14387 || ||| || | || ||| ||| ||||| ||| |||||||||| ||| | Sbjct 6010731 GGCGTGCCGGGCGCCATGCCCCACAACGACAAGTTCGAGCTCTCGGACATGAACGCCCTG 6010790 Query 14388 GTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCG 14447 | | | ||||| ||||| ||| ||||| || | || || || || | |||||| Sbjct 6010791 CCCCGCCTGGTCAAATGGCAGTACCTGGAGGGCGACACCAGCAAGGGAGCGCCCTACCCG 6010850 Query 14448 CCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG 14507 || ||| |||| || | |||| ||||||||| |||| ||| |||||| ||| Sbjct 6010851 CCCTGCACCGGCCGGTACCAGCGCGCCGTCTGCATCTACGGGGTCGGAGACGTGTCCTGG 6010910 Query 14508 CTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGAGTTCGCC 14567 || | | ||||| || ||||||||||||||| | || |||||| |||| Sbjct 6010911 ATGCTCCGGCAGCACCACCTCTTGGCCAACAAGTTCGACCCCCAGGTGGACGATGCCGCC 6010970 Query 14568 GTGCGCTGTCTGGACGAGGACGTGCGC 14594 | | || || || ||| || ||||| Sbjct 6010971 ATCCAGTGCCTCGAGGAGCACCTGCGC 6010997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658676677415680