Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq25 259 6e-64
>seq25
Length=8201792
Score = 259 bits (286), Expect = 6e-64
Identities = 616/927 (66%), Gaps = 12/927 (1%)
Strand=Plus/Plus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
|| |||||| ||| |||| |||||||||||| |||||||| || || |||||| ||||
Sbjct 6010080 CCACTGAGCAAGGAGGAGGCCGAGTTTCCCATTGCCTACTCCATAGTCATCCACAACAAA 6010139
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
||||||||||||||||| |||||| || | |||||| || ||||| ||||||| |||
Sbjct 6010140 ATCGAGATGTTCGAGCGGCTCCTGCGGTCTGTCTACGTGCCACAGAATGTCTACTGTGTC 6010199
Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGC 13850
||| ||||| ||||||| | | ||| || ||| |||||||||| |||
Sbjct 6010200 CACATGGACAGCAAGTCCCCAGCTGCCTTCCAGGAGGCCGTGAGGGCCATCGCCGCCTGC 6010259
Query 13851 TTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGC 13910
||||| ||||| ||||| ||| ||| | ||||||| || | ||||||| |||
Sbjct 6010260 TTCCCCAACGTCTTTGTGGCCAGCCGCCTGGAGAACGTGGTCTATGCCTCCTGGTCACGC 6010319
Query 13911 GTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTAC 13970
||||||| ||||||| ||||||| ||||||| |||||| |||| |||
Sbjct 6010320 CTGCAGGCTGACCTCAACTGCATGCAGGACCTGCTGCAGAGCCCCGTGCCGTGGCACTAC 6010379
Query 13971 CTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCG 14030
| |||||| ||||| | |||||||| |||| ||||| |||||| || || ||
Sbjct 6010380 GTCCTCAACACCTGCGGCACCGACTTCCCCATCAAAACCAATGCGGAGATGGTCCGCGCC 6010439
Query 14031 CTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCAT-GCCCAACCACAAG 14087
|| || ||| || ||||| | ||||| | || | ||| | || || | ||
Sbjct 6010440 CTCCAGATGCTGCAGGGGCAGAACAGCATGGAGTCGGAGAAGCCATCGTCCTACAAGCAG 6010499
Query 14088 CTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGC 14147
|||| | | || | | |||| ||| || | | | ||| || |
Sbjct 6010500 CTGCGGTGGA--AGTACCA-CCACGAAGTG------GGGGATGCCATCTCCAAGACATCC 6010550
Query 14148 AGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCG 14207
| | ||| ||| | |||||||| ||||| || |||| | ||| ||| |||||
Sbjct 6010551 ACCGAGAAGCTGCCGTCACCGCTCAGCTCGCCCATGTTCACGGGCAGCGCGTACATTGCG 6010610
Query 14208 GTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCAC 14267
|| || |||| |||||| | | || || ||||| | ||| | | | || |
Sbjct 6010611 GTGACGCGGGCCTTCGTGCAGCACATCTTCGAGGACCCCACAGTGCTGCAGTTTCTGGAG 6010670
Query 14268 TGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC 14327
||| | ||||||| |||||||||||||||||| | ||||| ||| | | ||
Sbjct 6010671 TGGGCCAAGGACACCTACAGCCCCGACGAGCACGTCTGGGCTACCCTCACCCGTGTGCCT 6010730
Query 14328 GGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAG 14387
|| ||| || | || ||| ||| ||||| ||| |||||||||| ||| |
Sbjct 6010731 GGCGTGCCGGGCGCCATGCCCCACAACGACAAGTTCGAGCTCTCGGACATGAACGCCCTG 6010790
Query 14388 GTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCG 14447
| | | ||||| ||||| ||| ||||| || | || || || || | ||||||
Sbjct 6010791 CCCCGCCTGGTCAAATGGCAGTACCTGGAGGGCGACACCAGCAAGGGAGCGCCCTACCCG 6010850
Query 14448 CCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG 14507
|| ||| |||| || | |||| ||||||||| |||| ||| |||||| |||
Sbjct 6010851 CCCTGCACCGGCCGGTACCAGCGCGCCGTCTGCATCTACGGGGTCGGAGACGTGTCCTGG 6010910
Query 14508 CTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGAGTTCGCC 14567
|| | | ||||| || ||||||||||||||| | || |||||| ||||
Sbjct 6010911 ATGCTCCGGCAGCACCACCTCTTGGCCAACAAGTTCGACCCCCAGGTGGACGATGCCGCC 6010970
Query 14568 GTGCGCTGTCTGGACGAGGACGTGCGC 14594
| | || || || ||| || |||||
Sbjct 6010971 ATCCAGTGCCTCGAGGAGCACCTGCGC 6010997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658676677415680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |