Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq60 118 9e-22
seq131 96.9 3e-15
>seq60
Length=5294655
Score = 118 bits (130), Expect = 9e-22
Identities = 129/169 (76%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282
||| || |||| |||||||| || |||||||||||||| || || || ||||||| |||
Sbjct 706344 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAGTC 706403
Query 30283 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341
||||| || || |||| || ||| ||| |||| || || | || || ||||| |
Sbjct 706404 CCCCTCCTCTCTGGTGC-AAAAACCCTGCTTATCCAGGAATTCACGTGATCCATTGGCAT 706462
Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390
|||| ||||| || ||||| ||||||||||||||| ||||| || ||
Sbjct 706463 CCCAAATCTTCACACCCTTTGCAGAGAGCTCTTTGGCATTTGTCGAACC 706511
>seq131
Length=2612808
Score = 96.9 bits (106), Expect = 3e-15
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460
|| |||||||||||||| |||| || || |||||| ||| ||| | || ||| || ||
Sbjct 1892568 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTCAAAGGACGATGCTTCTCAGGA 1892627
Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508
||||||||||| || ||| ||||||||||||| | ||||| || |||
Sbjct 1892628 ATGGAGAACCAGGTTTTTTTACCCATTATCACTGCATTCTGTTTACCT 1892675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406272800162556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |