Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq60 118 9e-22 seq131 96.9 3e-15 >seq60 Length=5294655 Score = 118 bits (130), Expect = 9e-22 Identities = 129/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||| || |||| |||||||| || |||||||||||||| || || || ||||||| ||| Sbjct 706344 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAGTC 706403 Query 30283 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341 ||||| || || |||| || ||| ||| |||| || || | || || ||||| | Sbjct 706404 CCCCTCCTCTCTGGTGC-AAAAACCCTGCTTATCCAGGAATTCACGTGATCCATTGGCAT 706462 Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 |||| ||||| || ||||| ||||||||||||||| ||||| || || Sbjct 706463 CCCAAATCTTCACACCCTTTGCAGAGAGCTCTTTGGCATTTGTCGAACC 706511 >seq131 Length=2612808 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || |||||||||||||| |||| || || |||||| ||| ||| | || ||| || || Sbjct 1892568 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTCAAAGGACGATGCTTCTCAGGA 1892627 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||||||||| || ||| ||||||||||||| | ||||| || ||| Sbjct 1892628 ATGGAGAACCAGGTTTTTTTACCCATTATCACTGCATTCTGTTTACCT 1892675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406272800162556