Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq85 104 2e-17
seq60 96.9 3e-15
>seq85
Length=4040874
Score = 104 bits (114), Expect = 2e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
||||| || || ||||||||||| ||||| |||||||| || || || || ||||| |||
Sbjct 3952988 GTTGTGGAGGATCTCTTCCGAGACGGGGTGAACTGGGGCCGGATCGTGGCCTTCTTCGAG 3952929
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| || || || ||||| || || |||||||| | | || | |||| || |||| |
Sbjct 3952928 TTCGGCGGCGTGATGTGCGTCGAGAGCGTCAACCGGGAGATGTCTCCCCTGGTGGACAGC 3952869
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| ||||| |||||||| ||
Sbjct 3952868 ATCGCCGCCTGGATGACCGA 3952849
>seq60
Length=5294655
Score = 96.9 bits (106), Expect = 3e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|||||||| | || |||||||||||||| | || |||||||| | ||| |||||
Sbjct 699206 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGC 699265
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| || || ||||| ||| | || ||||| || | ||||||||| | || |||||| |
Sbjct 699266 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCTCCGTTTAGA 699325
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694
||||| ||||| | | | ||||| || |||| | ||||
Sbjct 699326 ACATAGAACTGGCAAAGGGCATGACAAGGTGGCAAAGCCAT 699366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414438444446452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |