Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq131 96.9 3e-15
seq60 96.9 3e-15
>seq131
Length=2612808
Score = 96.9 bits (106), Expect = 3e-15
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| |||||||||||||| |||| || | |||||| ||| ||| | || ||| || ||
Sbjct 1892568 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTCAAAGGACGATGCTTCTCAGGA 1892627
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||||||||| || ||| ||||||||||||| | ||||| ||||||
Sbjct 1892628 ATGGAGAACCAGGTTTTTTTACCCATTATCACTGCATTCTGTTTACCT 1892675
>seq60
Length=5294655
Score = 96.9 bits (106), Expect = 3e-15
Identities = 111/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT-GTGCTCGAA 30075
|| |||||||||||||| || || || ||||||| ||| ||||| || || |||| ||
Sbjct 706366 AAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAGTCCCCCTCCTCTCTGGTGC-AAAA 706424
Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135
||| ||| |||| || || | || || ||||| ||||| ||||| || ||||| |
Sbjct 706425 ACCCTGCTTATCCAGGAATTCACGTGATCCATTGGCATCCCAAATCTTCACACCCTTTGC 706484
Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCC 30162
||||||||||||| ||||| || ||
Sbjct 706485 AGAGAGCTCTTTGGCATTTGTCGAACC 706511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406125613784398
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |