Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq131 96.9 3e-15 seq60 96.9 3e-15 >seq131 Length=2612808 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || |||||||||||||| |||| || | |||||| ||| ||| | || ||| || || Sbjct 1892568 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTCAAAGGACGATGCTTCTCAGGA 1892627 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||| || ||| ||||||||||||| | ||||| |||||| Sbjct 1892628 ATGGAGAACCAGGTTTTTTTACCCATTATCACTGCATTCTGTTTACCT 1892675 >seq60 Length=5294655 Score = 96.9 bits (106), Expect = 3e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT-GTGCTCGAA 30075 || |||||||||||||| || || || ||||||| ||| ||||| || || |||| || Sbjct 706366 AAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAGTCCCCCTCCTCTCTGGTGC-AAAA 706424 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| ||| |||| || || | || || ||||| ||||| ||||| || ||||| | Sbjct 706425 ACCCTGCTTATCCAGGAATTCACGTGATCCATTGGCATCCCAAATCTTCACACCCTTTGC 706484 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCC 30162 ||||||||||||| ||||| || || Sbjct 706485 AGAGAGCTCTTTGGCATTTGTCGAACC 706511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406125613784398