Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq13 114 3e-20
>seq13
Length=12215238
Score = 114 bits (126), Expect = 3e-20
Identities = 126/166 (76%), Gaps = 4/166 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || || ||||| || || |||||| | |||||||| || |||
Sbjct 3521136 CAGATCTTTGTGAAGACCCTGACAGGTAAGACCATCACCTTGGAGGTGGA--GCCCAGCG 3521079
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| || || ||||| ||||| ||||||||||| || || || ||||| ||||
Sbjct 3521078 ACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCGGATCAGC 3521019
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
| | || |||||||| || || ||||| ||||||||| | || ||
Sbjct 3521018 AGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCT 3520973
Score = 105 bits (116), Expect = 2e-17
Identities = 132/179 (74%), Gaps = 4/179 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || || || || || || |||||| | ||||| || || |||
Sbjct 3521511 CAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCTTGGAGGTCGA--GCCCAGCG 3521454
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| ||||| ||||| |||||||| || || || ||||| |||||||
Sbjct 3521453 ACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGC 3521394
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
| | || ||||| || || || ||||| ||||| || | || || |||| || |||
Sbjct 3521393 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 3521335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203614094634042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |