Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq32638 96.9 4e-15
>seq32638
Length=16397
Score = 96.9 bits (106), Expect = 4e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 16983 ATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTT 17042
|| |||| ||||| ||||| |||||||||||||| || | ||| ||||| |||| ||
Sbjct 13463 ATACCTCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGCCCAGGCATTAAGCCTCTTT 13522
Query 17043 TCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAA 17102
|||| | ||||||||| | || || || ||||||||||| || || || || | ||||
Sbjct 13523 TCTTCAGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCCGCAA 13582
Query 17103 ACGCGATTAATCGTTC 17118
| || | || |||||
Sbjct 13583 AAGCTACTACACGTTC 13598
Score = 82.4 bits (90), Expect = 8e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || || || || || ||||||||||| || |||||||| |||||||| |||||
Sbjct 15616 ATGTAGGTGTCAATAAGAAGACTGTACATTTCAGAATGTATGTTTTCCATGGCAATCTGG 15675
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331
|| || || || ||||| ||||| | ||||| |||||
Sbjct 15676 AAGCCATAGAAACATCGAGCTTCTGTGATTTGTACTTC 15713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517091958342960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |