Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq19977 143 2e-29
seq15741 118 8e-22
>seq19977
Length=118669
Score = 143 bits (158), Expect = 2e-29
Identities = 224/318 (70%), Gaps = 2/318 (1%)
Strand=Plus/Plus
Query 20451 TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAA 20510
|||||| || || || | ||||| | || | ||||||||||| || || ||||||||
Sbjct 57425 TGAATTATCTTGCCAGCTCTATCAGAGGTCTGGAGATATGGGACTTGGAGTGCCTTTCAA 57484
Query 20511 TATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGG 20570
|||||| || ||| | ||||| || ||||||||||| ||||| |||| |||| | ||
Sbjct 57485 TATTGCCAGCTATTCACTGCTCACCTATATGATTGCCCATGTCACAGGGCTAAAGCCTGG 57544
Query 20571 TGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630
|| || | ||||| | ||||| || || || ||||| |||||| |||||||| ||||
Sbjct 57545 AGAGTTCATACACACATTTGGAGATGCTCACATATACCTGAATCATCTAGAACCTCTAAA 57604
Query 20631 A-TTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTA 20689
| || | || | | || | |||| || || || | || | ||| | | | |||
Sbjct 57605 AGTTCAACTTCAGA-GAGAGCCAAGACCTTTTCCCAAACTCAGAATTCTTTGTAAGGTTG 57663
Query 20690 AAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATT 20749
|||| || | || ||||| || || || ||| | | |||| || |||||| |||
Sbjct 57664 AAGACATCAGTGACTTTAAGGCAGAAGACTTTCAGATTGAAGATTCTAATCCTCATCCAC 57723
Query 20750 CAATTCCAATGGAAATGT 20767
| ||| |||||| ||||
Sbjct 57724 CCATTAAAATGGAGATGT 57741
>seq15741
Length=12914
Score = 118 bits (130), Expect = 8e-22
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447
|||| | || | ||||||||||||||||| ||| || ||||| || || ||| ||
Sbjct 7670 AGATATTTCTCTGATGGCTTTGCCTCCATGCCATGCCCTTTGCCAGTTCTATGTTCTAAA 7611
Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507
| |||||| || || || | ||||| | || | ||||||||||| || || |||||
Sbjct 7610 TGGTGAATTATCTTGCCAGCTCTATCAGAGGTCTGGAGATATGGGACTTGGAGTGCCTTT 7551
Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557
||||||||| || ||| | ||||| || ||||||||||| || || ||||
Sbjct 7550 CAATATTGCCAGCTATTCACTGCTCACCTATATGATTGCCCACGTCACAG 7501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398842852613290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |