Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq32638 123 2e-23
>seq32638
Length=16397
Score = 123 bits (136), Expect = 2e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
||||||||||||| || |||||||| ||||| || | || ||||| || |||| ||| |
Sbjct 13466 CCTCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGCCCAGGCATTAAGCCTCTTTTCT 13525
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| | ||||||||||| || ||||| || |||||||| ||||| || ||||| ||||| |
Sbjct 13526 TCAGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCCGCAAAAG 13585
Query 14346 CTATTAATCGTTCTCC 14361
||| || ||||||||
Sbjct 13586 CTACTACACGTTCTCC 13601
Score = 105 bits (116), Expect = 6e-18
Identities = 93/116 (80%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 14457 TCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 14516
||||||||| | | |||||| || |||||||| | || ||||||||||| |||||||
Sbjct 15599 TCTCTTTAGAATCTTTAATGTAGGTGTCAATAAGAAGACTGTACATTTCAGAATGTATGT 15658
Query 14517 TTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCT 14572
||||||| || ||||| || ||||| ||||||| |||||||| |||||| |||
Sbjct 15659 TTTCCATGGCAATCTGGAAGCCATAGAAACATCGAGCTTCTGTGATTTGTACTTCT 15714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481922812022960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |