Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq32638 129 6e-25
>seq32638
Length=16397
Score = 129 bits (142), Expect = 6e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
||||||||||||| || |||||||| ||||| || | || ||||| || |||| ||| |
Sbjct 13466 CCTCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGCCCAGGCATTAAGCCTCTTTTCT 13525
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||||||||||| |||||||| || |||||||| ||||| || ||||| ||||| |
Sbjct 13526 TCAGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCCGCAAAAG 13585
Query 14014 CTATTAATCGTTCTCC 14029
||| || ||||||||
Sbjct 13586 CTACTACACGTTCTCC 13601
Score = 100 bits (110), Expect = 3e-16
Identities = 91/115 (79%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 14125 TCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 14184
||||||||| | | |||||| || |||||||| | || ||||||||||| |||||||
Sbjct 15599 TCTCTTTAGAATCTTTAATGTAGGTGTCAATAAGAAGACTGTACATTTCAGAATGTATGT 15658
Query 14185 TTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC 14239
||||||| || ||||| || ||||| || |||| |||||| | |||||||||
Sbjct 15659 TTTCCATGGCAATCTGGAAGCCATAGAAACATCGAGCTTCTGTGATTTGTACTTC 15713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479307506414800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |