Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq19977 104 3e-17
>seq19977
Length=118669
Score = 104 bits (114), Expect = 3e-17
Identities = 194/280 (69%), Gaps = 10/280 (4%)
Strand=Plus/Plus
Query 70296 ATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCT 70355
|||| |||| || ||| | ||||||||| || || ||||| || || || || |
Sbjct 57421 ATGGTGAATTATCTTGCCAGCTCTATCAGAGGTCTGGAGATATGGGACTTGGAGTGCCTT 57480
Query 70356 TTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAG 70415
| || ||||| |||||||| || | || | |||||||| || | || || || ||||
Sbjct 57481 TCAATATTGCCAGCTATTCACTGCTCACCTATATGATTGCCCATGTCACAGGGCT-AAAG 57539
Query 70416 C--GCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCC 70473
| | | |||||| ||||||| |||| || |||||| | || | ||||| | || ||
Sbjct 57540 CCTGGA-GAGTTCATACACACATTTGGAGATGCTCACATATACCTGAATCATCTAGAACC 57598
Query 70474 ATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAA 70533
|||| || ||||| | | ||||| |||||||||||||| || || | ||||
Sbjct 57599 TCTAAAAGTTCAACTTCAGAGAGAGCCAAGACCTTTTCCCAAACTCAGAATTCTTTGTAA 57658
Query 70534 AGTTGAAAATAT---TGACAGTTTTAAGTACGAAGATTTT 70570
|||||| | || |||| |||||| ||||| |||
Sbjct 57659 GGTTGAAGACATCAGTGAC---TTTAAGGCAGAAGACTTT 57695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740409643084720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |