Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq25834 129 9e-26
seq59953 118 2e-22
>seq25834
Length=1395
Score = 129 bits (142), Expect = 9e-26
Identities = 191/271 (70%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 36 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCAT 95
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| ||||| || || |||||| |||| || | |||| || ||||
Sbjct 96 CCGCCGCCTGGCTCGGCGTGGCGGCGTGAAGCGTATCTCGGGGCTCATCTACGAGGAGAC 155
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| | ||||| ||| ||| |||| || || || ||| |||||
Sbjct 156 GCGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 215
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || || ||||||| | || || || | || || || ||
Sbjct 216 GCACGCCAAGAGGAAGACGGTGACGGCCATGGACGTGGTGTACGCCCTTAAGCGCCAGGG 275
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
|| | | || || ||||| ||||| ||
Sbjct 276 ACGCACCCTCTACGGCTTTGGTGGTTAAACT 306
>seq59953
Length=266
Score = 118 bits (130), Expect = 2e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 258 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCAT 199
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| ||||| || || ||||| |||| || | |||| || ||||
Sbjct 198 CCGCCGCCTGGCTCGGCGTGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 139
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| | ||||| ||| ||| |||| || || || ||| |||||
Sbjct 138 GCGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 79
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || | ||||| || || |||||||
Sbjct 78 GCACGCCAAGAGGAAGACGGTGACGGCCATGGA 46
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79011086964546
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |