Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq32638 107 2e-18 >seq32638 Length=16397 Score = 107 bits (118), Expect = 2e-18 Identities = 111/144 (77%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 || || |||| |||| ||||| || | ||| |||||||| || | || |||||||| || Sbjct 13459 ATTCATACCT-CATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGCCCAGGCATTAAGCC 13517 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609 ||| || || | |||||||||||| ||||||| || |||||||| || || || || || Sbjct 13518 TCTTTTCTTCAGCCAAAATATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGC 13577 Query 21610 AGCAAATGCAACTAATCGTTCACC 21633 ||||| || |||| ||||| || Sbjct 13578 CGCAAAAGCTACTACACGTTCTCC 13601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531434575651280