Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq15741 86.0 2e-11 >seq15741 Length=12914 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||||||||| || || || | ||||| ||| || |||||||||| ||||||||||| Sbjct 10896 TACAAATGCCAAAGAGCTCTCTGCAAAGGGTGTGAAGATTTGGGATGCTAATGGATCACG 10837 Query 111449 TGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 ||| || || ||| ||| ||| | | || || || || ||| | ||||||||| Sbjct 10836 TGAGTTCCTGGATAAGCAG--GGTTTCAGCACCAGAGAGGAGGGGGATTTGGGACCAGTT 10779 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || || ||| | || ||||| || || |||||| |||||| Sbjct 10778 TATGGTTTCCAGTGGAGGCATTTTGGAGCGGAATACAAAGATATGCAC 10731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302182617435404