Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq23382 87.8 3e-12
seq22336 87.8 3e-12
seq7389 86.0 1e-11
>seq23382
Length=2546
Score = 87.8 bits (96), Expect = 3e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156
|||||||||||||| || || || | ||| ||||| ||| ||| || |||||||||
Sbjct 2290 ACCTGAAACTCTCCTGAGAGGACTCTGCGTGTGTAGATGTTACTGGTGTAGGGCTCGATG 2231
Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216
||| | |||||||| ||||| || || ||||| |||||||| || | || ||
Sbjct 2230 GACTCGTTATTGCCCAGGATCTGAGCAGTAGAAGCAGTTGGCATGGGAGAAAGGAGAAGG 2171
Query 244217 CTGTTCCTCACGCCGT 244232
||||| || |||||||
Sbjct 2170 CTGTTTCTGACGCCGT 2155
>seq22336
Length=52721
Score = 87.8 bits (96), Expect = 3e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| ||||| |||| |||||| | | || || ||||||||||| ||||| |||| ||
Sbjct 42335 GGTGAGAGAGTGGTTGCCTTTGCTTCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCT 42276
Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815
| || || ||||| ||| ||| || |||||| ||||| || ||||| || |||||
Sbjct 42275 GCTATATTTTGGCTGAAGAAGAGGGGCCTGATGCCTGGACTAACTTTCTCCAATGAACTG 42216
Query 42816 ATCAGCAGGGACGAGG 42831
|| ||||| || ||||
Sbjct 42215 ATTAGCAGAGATGAGG 42200
>seq7389
Length=11090
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 244706 ACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTG 244765
||||| || | |||| |||| || || || || || || || ||||| ||||||||
Sbjct 1589 ACCTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTC 1648
Query 244766 CCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCC 244825
|||| || ||| |||||| ||| |||||| | ||| |||||||||||| |||||
Sbjct 1649 CCCAAGTTCTGCTGATTGCTCTTCCTGTTGCAAGAGTCTTTGTAGAGCATGTAGGGCGTG 1708
Query 244826 CCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTG 244885
|| ||||| ||||| ||| || || |||||| | | ||||| ||| |||
Sbjct 1709 CCAGTCTCTGTCTGGGATTCGATGATAGCGTACCAGAGCTGCTGGGCCTTCACCACTCTG 1768
Query 244886 CG 244887
||
Sbjct 1769 CG 1770
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTC 245067
|| ||||||||| || || ||||| ||||| ||| ||||| |||| | |||||| ||
Sbjct 3148 CTTCATGAAGAGATCAGGAATCCAAAGGGCAAAGAAAAGGTCTCTGGCTCGCTGCTCTTC 3207
Query 245068 CGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCAT 245127
|||||||||||| | | || | ||| ||||||| ||| | ||||| |||||||
Sbjct 3208 TTTCCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCACGGCTCCAG 3267
Query 245128 GTAGA 245132
|||||
Sbjct 3268 GTAGA 3272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943511463082720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |