Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq22004 91.5 2e-13
seq61219 89.7 6e-13
seq46386 82.4 8e-11
>seq22004
Length=9634
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 324 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 265
Query 57067 TACTACCGAGGATTG 57081
||||| |||||| ||
Sbjct 264 TACTAACGAGGAGTG 250
>seq61219
Length=303
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 2 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 61
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 62 TACTAACGAGGA 73
>seq46386
Length=15654
Score = 82.4 bits (90), Expect = 8e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
|| ||| | |||||||||||||| |||| ||| || || | || |||||||||||||||
Sbjct 15133 GTACTCACTTTTTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCTAGCTGCTTACCA 15192
Query 42072 GCGAATATGAGTCGCTGCTGGTC 42094
|| || || ||||||||||| ||
Sbjct 15193 GCAAAAATCAGTCGCTGCTGATC 15215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542736660400480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |