Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7389 87.8 2e-12 >seq7389 Length=11090 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | ||||| || | || || || |||||||| || || || ||||| ||||||||| Sbjct 1743 TGGTACGCTATCATCGAATCCCAGACAGAGACTGGCACGCCCTACATGCTCTACAAAGAC 1684 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 | || ||| ||||| ||||| |||| ||||| ||||| | ||| || ||| Sbjct 1683 TCTTGCAACAGGAAGAGCAATCAGCAGAACTTGGGGACCATCAAATGCAGCAATCTGTGT 1624 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 112430 |||||||| |||| | ||| |||||||||| Sbjct 1623 ACAGAAATAGTGGAGTATACCAGCAAAGATGAG 1591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620198303767840