Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq37685 116 8e-21
seq46386 84.2 5e-11
>seq37685
Length=54521
Score = 116 bits (128), Expect = 8e-21
Identities = 163/225 (72%), Gaps = 8/225 (4%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| || | || ||||| || || ||||| || || | || |||||||||| |||| |
Sbjct 54184 TCTCAGGCGCAGGACAAGATGGAGGGTGGATTCCTTCTAGATGTTGTAATCGGACAAG-G 54242
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
| | |||||||| |||||||| || || ||||| || | || || || || |||||||
Sbjct 54243 TACAACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGC 54302
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTT 195094
|||| ||||| || || || ||| || |||||||||||||| ||| || || |
Sbjct 54303 CTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCT 54359
Query 195095 CAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCA 195139
||||||| | ||||| || |||| || || || || | ||||
Sbjct 54360 CAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCA 54404
>seq46386
Length=15654
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010
|||||||||||||||| || | || || | |||||||| ||||||||||| || || |
Sbjct 15140 CTTTTTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCTAGCTGCTTACCAGCAAAAA 15199
Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| ||||| || || || ||||||||||||
Sbjct 15200 TCAGTCGCTGCTGATCAGGAGGAATGCCT 15228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108484799431574
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |