Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq37685 82.4 5e-11
>seq37685
Length=54521
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/193 (70%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| |||| ||||| || || || | | | | |||| |||||||| || || |||||
Sbjct 54214 TTCCTTCTAGATGTTGTAATCGGACAAGGTACAACCATCTTCCAGCTGCTTGCCAGCAAA 54273
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | ||||| || | || | || |||||||| ||||| || || |
Sbjct 54274 GATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 54331
Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967
| || || | |||| || |||||| || | ||| ||||| || || || || ||||||
Sbjct 54332 TTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 54391
Query 34968 ACAAAGATCTGCA 34980
|||||||||||||
Sbjct 54392 ACAAAGATCTGCA 54404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324356164270416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |