Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7389 91.5 3e-13 >seq7389 Length=11090 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 221732 ACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTC 221791 ||||| || ||| ||||||||| | || |||||||| || |||||||| ||||||||| Sbjct 1589 ACCTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTC 1648 Query 221792 CCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCG 221851 |||| || | ||||| ||| | ||| || ||| ||||||||||| |||| | Sbjct 1649 CCCAAGTTCTGCTGATTGCTCTTCCTGTTGCAAGAGTCTTTGTAGAGCATGTAGGGCGTG 1708 Query 221852 CCAGTCTC 221859 |||||||| Sbjct 1709 CCAGTCTC 1716 Score = 84.2 bits (92), Expect = 4e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078 || |||| || || | || ||||||||| || || ||||| || || || || || Sbjct 3130 CTGGTTGGTTTCAACTCGCTTCATGAAGAGATCAGGAATCCAAAGGGCAAAGAAAAGGTC 3189 Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138 ||||| |||||||| || || |||| ||| | | || | ||||||||| ||||| Sbjct 3190 TCTGGCTCGCTGCTCTTCTTTCCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTC 3249 Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 |||||||||||||| |||| ||| | ||| || |||| || Sbjct 3250 CAAATGCCACGGCTCCAGGTAGATGGCAAAAGCCCCAGGTCTCT 3293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928030644311680