Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq16688 116 2e-20
>seq16688
Length=7170
Score = 116 bits (128), Expect = 2e-20
Identities = 115/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787
|| ||| | || ||| | ||||| ||||| ||||| ||||| ||||| ||||| || ||
Sbjct 1134 GTTACTAACGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 1193
Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCA 474847
|||||||| |||| ||||||||||| ||||| | || ||||| ||||| || |||||
Sbjct 1194 AAAGATGCTGGAACCATTGCAGGTCTCAATGTACTGCGAATTATCAATGAGCCGACAGCT 1253
Query 474848 GCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|| || | || |||||||| || || ||
Sbjct 1254 GCTGCCATAGCCTATGGTCTGGACAAAAA 1282
Score = 98.7 bits (108), Expect = 6e-15
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149
|||||||| |||||||||||||| || ||||| |||||||| || ||||||||||||||
Sbjct 2808 GGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTTGATATTGATGCC 2867
Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
||||| || || ||||| ||||| |||||
Sbjct 2868 AATGGCATCCTGAATGTGTCTGCTGTGGATAA 2899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3265171327188056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |