Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq37685 104 2e-17 >seq37685 Length=54521 Score = 104 bits (114), Expect = 2e-17 Identities = 148/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 ||||||||||| | || || || || || || || || || || || || || ||| | Sbjct 54404 TGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGTG 54345 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 |||| | || | || || |||||||| ||||| ||||| || || |||||||| | Sbjct 54344 ACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGC 54285 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 | | |||||||||| || || |||||||| ||| | | | |||| ||||| |||| Sbjct 54284 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTTGTACCTTGTCCGATTACAACA 54225 Query 24885 TTCAAAAGGAATCGACACTACA-CTTG 24910 | | |||||||| || || || |||| Sbjct 54224 TCTAGAAGGAATCCACCCTCCATCTTG 54198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449503253506160