Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq37685 123 2e-23
seq7389 95.1 1e-14
>seq37685
Length=54521
Score = 123 bits (136), Expect = 2e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | |||||| || |||| || ||||||||| || || | || || |||||
Sbjct 54202 ATGGAGGGTGGATTCCTTCTAGATGTTGTAATCGGACAAGGTACAACCATCTTCCAGCTG 54261
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| || | || |||| |||||| ||||| || |||||||||||||| ||||||
Sbjct 54262 CTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 54321
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | | ||||| ||||| ||||||| || || | ||||| ||| ||||| ||
Sbjct 54322 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGT 54381
Query 133637 CAGAGTTTTTACGAAAATCTGCA 133659
||| || || || || |||||||
Sbjct 54382 CAGGGTCTTCACAAAGATCTGCA 54404
>seq7389
Length=11090
Score = 95.1 bits (104), Expect = 1e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925
||||| || || || | |||||||||||||||||||| |||| ||||| ||||||
Sbjct 1607 TACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 1666
Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
||||| |||||||| | ||| ||||| |||||||| || |||||| ||
Sbjct 1667 CTCTTCCTGTTGCAAGAGTCTTTGTAGAGCATGTAGGGCGTGCCAGTCTC 1716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482997069583280
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |