Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq19977 129 7e-25
seq15741 109 6e-19
>seq19977
Length=118669
Score = 129 bits (142), Expect = 7e-25
Identities = 187/264 (71%), Gaps = 0/264 (0%)
Strand=Plus/Minus
Query 146826 AAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGG 146885
||| ||||||||| | || || ||||| || ||| | | ||| |||| |||||
Sbjct 57695 AAAGTCTTCTGCCTTAAAGTCACTGATGTCTTCAACCTTACAAAGAATTCTGAGTTTGGG 57636
Query 146886 GAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGAC 146945
|| |||| || | || || |||| ||| || || || | || || ||||| |
Sbjct 57635 AAAAGGTCTTGGCTCTCTCTGAAGTTGAACTTTTAGAGGTTCTAGATGATTCAGGTATAT 57576
Query 146946 GTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCAC 147005
||| || || || | ||||| | || || || ||||| || || || || ||||| |
Sbjct 57575 GTGAGCATCTCCAAATGTGTGTATGAACTCTCCAGGCTTTAGCCCTGTGACATGGGCAAT 57516
Query 147006 CATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCC 147065
||| ||||||||||| || |||||||| || ||||| || || || || ||||| || ||
Sbjct 57515 CATATAGGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCAAGTCCCATATCTCC 57456
Query 147066 CGACCTCTGGTACAGCTGGCACGA 147089
|||||||| || |||||||| ||
Sbjct 57455 AGACCTCTGATAGAGCTGGCAAGA 57432
>seq15741
Length=12914
Score = 109 bits (120), Expect = 6e-19
Identities = 123/165 (75%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| || || || |||||||| | ||| ||||||||||| || |||||||| || |||||
Sbjct 7493 CTTTAGCCCTGTGACGTGGGCAATCATATAGGTGAGCAGTGAATAGCTGGCAATATTGAA 7552
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
|| || || || ||||| || || |||||||| || |||||||| || | || || |
Sbjct 7553 AGGCACTCCAAGTCCCATATCTCCAGACCTCTGATAGAGCTGGCAAGATAATTCACCATT 7612
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
|| || |||||||| ||| ||||| || |||| |||||
Sbjct 7613 TAGAACATAGAACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 7657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582976558180800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |