Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq19977 129 7e-25 seq15741 109 6e-19 >seq19977 Length=118669 Score = 129 bits (142), Expect = 7e-25 Identities = 187/264 (71%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 146826 AAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGG 146885 ||| ||||||||| | || || ||||| || ||| | | ||| |||| ||||| Sbjct 57695 AAAGTCTTCTGCCTTAAAGTCACTGATGTCTTCAACCTTACAAAGAATTCTGAGTTTGGG 57636 Query 146886 GAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGAC 146945 || |||| || | || || |||| ||| || || || | || || ||||| | Sbjct 57635 AAAAGGTCTTGGCTCTCTCTGAAGTTGAACTTTTAGAGGTTCTAGATGATTCAGGTATAT 57576 Query 146946 GTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCAC 147005 ||| || || || | ||||| | || || || ||||| || || || || ||||| | Sbjct 57575 GTGAGCATCTCCAAATGTGTGTATGAACTCTCCAGGCTTTAGCCCTGTGACATGGGCAAT 57516 Query 147006 CATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCC 147065 ||| ||||||||||| || |||||||| || ||||| || || || || ||||| || || Sbjct 57515 CATATAGGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCAAGTCCCATATCTCC 57456 Query 147066 CGACCTCTGGTACAGCTGGCACGA 147089 |||||||| || |||||||| || Sbjct 57455 AGACCTCTGATAGAGCTGGCAAGA 57432 >seq15741 Length=12914 Score = 109 bits (120), Expect = 6e-19 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || |||||||| | ||| ||||||||||| || |||||||| || ||||| Sbjct 7493 CTTTAGCCCTGTGACGTGGGCAATCATATAGGTGAGCAGTGAATAGCTGGCAATATTGAA 7552 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || || || ||||| || || |||||||| || |||||||| || | || || | Sbjct 7553 AGGCACTCCAAGTCCCATATCTCCAGACCTCTGATAGAGCTGGCAAGATAATTCACCATT 7612 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 || || |||||||| ||| ||||| || |||| ||||| Sbjct 7613 TAGAACATAGAACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 7657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582976558180800