Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq15741 102 6e-17
seq19977 95.1 9e-15
>seq15741
Length=12914
Score = 102 bits (112), Expect = 6e-17
Identities = 118/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| |||| ||| |||||||| || ||||| || || || ||||| || || |||||
Sbjct 7500 CCTGTGACGTGGGCAATCATATAGGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACT 7559
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897
|| || ||||||||||| || || ||||| ||||| || |||| || | | | |||
Sbjct 7560 CCAAGTCCCATATCTCCAGACCTCTGATAGAGCTGGCAAGATAATTCACCATTTAGAACA 7619
Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
|| || || ||||| |||| || |||||||| ||||||
Sbjct 7620 TAGAACTGGCAAAGGGCATGGCATGGAGGCAAAGCCATC 7658
>seq19977
Length=118669
Score = 95.1 bits (104), Expect = 9e-15
Identities = 209/311 (67%), Gaps = 2/311 (1%)
Strand=Plus/Minus
Query 111574 TCCATCTTTATAGCAGGATGAGGTCTATAATTCTCCAAT-TCAAAGTCATCAGCAACAAA 111632
||||| || || | |||||||| || ||| || |||| | |||||| || || |||
Sbjct 57736 TCCATTTTAATGGGTGGATGAGGATTAGAAT-CTTCAATCTGAAAGTCTTCTGCCTTAAA 57678
Query 111633 ATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTCG 111692
|| ||| |||| | | |||| | ||||| ||||| || | |||| ||
Sbjct 57677 GTCACTGATGTCTTCAACCTTACAAAGAATTCTGAGTTTGGGAAAAGGTCTTGGCTCTCT 57618
Query 111693 GGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACA 111752
||| || | || || ||| | || ||||| | || | || |||||||| |
Sbjct 57617 CTGAAGTTGAACTTTTAGAGGTTCTAGATGATTCAGGTATATGTGAGCATCTCCAAATGT 57558
Query 111753 ATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACT 111812
|| || || || | ||||| | || |||| || |||||||| || ||||| ||
Sbjct 57557 GTGTATGAACTCTCCAGGCTTTAGCCCTGTGACATGGGCAATCATATAGGTGAGCAGTGA 57498
Query 111813 GTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTG 111872
|| || ||||| || || ||||| || || ||||||||||| || || ||||| |||||
Sbjct 57497 ATAGCTGGCAATATTGAAAGGCACTCCAAGTCCCATATCTCCAGACCTCTGATAGAGCTG 57438
Query 111873 ACATGATAGTT 111883
|| |||| ||
Sbjct 57437 GCAAGATAATT 57427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391610638635886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |