Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq22336 98.7 1e-15
seq15 91.5 2e-13
>seq22336
Length=52721
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| |||| |||||| || || | || |||||||| || || | |||||||
Sbjct 42202 TCATCTCTGCTAATCAGTTCATTGGAGAAAGTTAGTCCAGGCATCAGGCCCCTCTTCTTC 42261
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
| |||||| || ||| |||||||| |||||||||||||| || | ||||||||
Sbjct 42262 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGAAGCAAAGGCA 42321
Query 74892 AC 74893
||
Sbjct 42322 AC 42323
>seq15
Length=38515
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|| ||||| || |||| ||| ||||||||||| |||||| ||| | ||||| || ||
Sbjct 5683 GTAAAAATATAGCGAGGGCTGGCAGCATCCTTTCCACCATGAAGCCTGGTACCAAACTGA 5742
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| | || || | ||||| ||| |||||||| |||||||||||||||
Sbjct 5743 CCAATAGGCTGTAGCAGATTAACATTGTTACTGCCAACAAAGTTCTGAGCCAAGTTGACA 5802
Query 117425 ATCGT 117429
|| ||
Sbjct 5803 ATAGT 5807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546736351495600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |